Vigna angularis (adzuki bean): 108318783
Help
Entry
108318783 CDS
T04660
Name
(RefSeq) prolycopene isomerase, chloroplastic isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var00906
Carotenoid biosynthesis
var01100
Metabolic pathways
var01110
Biosynthesis of secondary metabolites
Module
var_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
var00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
108318783
Enzymes [BR:
var01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
108318783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
GIDA
HI0933_like
Thi4
GDI
FAD_binding_3
Pyr_redox_2
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
108318783
NCBI-ProteinID:
XP_052730400
LinkDB
All DBs
Position
3:complement(40252598..40260273)
Genome browser
AA seq
606 aa
AA seq
DB search
MTTSPFLSLCRHPFSHTSHRFPTGAASQSSNFLPKFQSFASGNHAGSEFPSGFCSNALRR
KRVSVVCSKSTLNVEEVAERGVKGKGEEFDAIVIGSGIGGLVAGTQLAVKGARVLVLEKY
VIPGGSSGFYQRDGYTFDVGSSVMFGFSDKGNLNLITQALEAVGCQMQVVPDPTTVHFHL
PNNLSVRVHKEYDKFIDELTSYFPHEKEGILKFYSECWKIFNALNSLELKSLEEPLYLFG
QFFQKPLECLTLAYYLPQNAGAIARKYIKDPSLLSFIDAECFIVSTVNAIQTPMINASMV
LCDRHFGGINYPLGGVGGIAKSLAKGLVDQGSEIVYKANVTGIIIEQGKAVGVRLADGRE
FFAKTIISNATRWDTFGKLLKGVPLPKEEENFQKVYVKAPSFLSIHMGVKAEILPPDTDC
HHFVLESNWSELEDSYGSIFLSIPTVLDSSLAPEGRHILHIFTTSSMGDWEGLSRVEYEA
KKQLVADEIISRLENKLFPGLRSSIDFIEVGTPKTHRRYLARDKGTYGPMPRGTPKGLLG
MPFNTTGIAGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVLDSMLLRLLG
WIRTMA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttcccctttcctctctctttgtcgtcaccccttttcccacacttctcatcgt
ttcccaacaggggctgcttctcaaagttcaaactttctgccaaagtttcaatcttttgct
tctggaaaccatgcagggagtgaatttccatctgggttctgctcaaatgctctcagaaga
aaaagggtgtccgtggtgtgctcaaagtcaactctgaatgtggaagaagtggcagagaga
ggagtgaagggtaagggtgaagagtttgatgcaattgttatagggtctgggattggaggg
ttggttgcaggaacacagttggcagtgaagggtgccagagttttggttttagagaagtat
gtgattcctggtggaagctctggattttaccagagggatggctatacttttgatgtgggc
tcttctgtcatgtttggtttcagtgataagggtaatctcaatttgataacacaagcgttg
gaggcagtcggttgtcagatgcaagtagtacctgatccaacaactgttcatttccatcta
ccaaataacctttctgttcgagtgcacaaagaatatgataaattcattgatgaactgacc
agttactttccgcatgaaaaggagggtattcttaaattctacagtgaatgctggaagatt
ttcaatgcgctgaattccttggagttgaagtcactggaagagccactctacctttttgga
cagttttttcagaagcccctggaatgcttgacactagcctattatttgcctcaaaatgct
ggagccatagctcggaagtacattaaagatccaagcttgttgtctttcatagacgcagag
tgttttatagtgagcacagtcaacgctatacagacaccaatgatcaatgctagcatggtt
ctatgtgacagacactttggtgggatcaactaccctcttgggggtgtcggtgggattgca
aagtccttagcaaaaggtcttgttgatcagggtagtgagatagtttacaaagcaaatgtc
actggtattataattgagcagggcaaagctgtaggtgtgaggcttgctgatgggagagag
ttctttgccaaaaccataatatcaaatgctactagatgggatacatttggaaagttgctg
aagggtgttccactgccaaaagaagaagagaacttccagaaagtttatgttaaagctcca
tcttttctttcaattcacatgggggttaaagcagagattttaccaccagatacagactgt
caccattttgtccttgagagcaactggtccgaattagaggattcatatggaagtatcttt
ttaagtataccaactgttcttgattcatcattggctcccgaaggtcgccatatccttcat
atattcacaacttcttccatgggggactgggagggtctctcaagagtagaatacgaggca
aagaagcagcttgtagccgatgaaatcataagcagattagagaataaattgtttccaggt
cttagatcatccatcgattttatagaggtagggacaccaaagacacacaggcgataccta
gctcgtgacaaggggacgtacggcccaatgccacgtggaacaccaaaggggttattggga
atgccatttaatacaacaggcatagctggtctttattgtgttggtgatagctgcttccct
ggacaaggtgttattgctgtagctttctccggagttatgtgtgctcaccgagtagctgca
gatattgggctggagaaaaagtcacctgtgttggattccatgctgcttcggttgcttggt
tggataagaacaatggcatga
DBGET
integrated database retrieval system
