Vigna angularis (adzuki bean): 108318955
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Entry
108318955 CDS
T04660
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108318955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108318955
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108318955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
CTD
Motif
Other DBs
NCBI-GeneID:
108318955
NCBI-ProteinID:
XP_017405441
UniProt:
A0A8T0L5N6
LinkDB
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Position
2:complement(52229595..52233019)
Genome browser
AA seq
393 aa
AA seq
DB search
MFGSAQPSSSPFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPSFATPSSTPAFGTPSSTP
AFGASSTPAFGSSLLSTPFSSQPQQQQQQQLTPLFQQQPTSSPFGFQSSLAAPQPSPFSN
AQLTTQMANVAPVPFSLADRDVQTIVDAYKEDPGNPKYAFKHLLFSVTEPQFRVKPAGVS
DIMWAEAMGKLEGMDSADRERLWPQLVQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKM
LQRHFQADTLPWIQRLKQKEQILQQRLLRVMRVVEALEGKGCRIPLTKGEAELAEKLATI
TRQLKGSGAELSRRVQNLLTVSRVKANSNGFGGSVYLPGSTKIHDQSLADLQEVLQQQME
AIARLGGVLKRDIRNMEIMITDDTGRIENENLI
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctccgctcaaccttcttcatctccctttggcaccccttcttcaacccctgca
ttcggaaccccttcttctacccccgccttcggaaccccttcttctacccctgccttcggc
accccttcttttgctaccccatcttctactccggcattcggaaccccatcttccacaccg
gcgtttggcgcttcttctacccctgccttcggttcgtcccttttgtcaacgcctttttct
tctcaaccacaacagcagcagcagcaacaactaactccactgtttcaacaacaaccaact
tcttctcctttcggctttcaaagttccctcgcagcgccgcaaccctcgcctttctcaaat
gcgcaattaaccactcagatggctaacgtggcacctgttcctttctctctcgccgatcgc
gatgttcaaacaatcgttgatgcttacaaggaagatcctggaaaccccaagtacgctttc
aagcatttgttgttcagtgtaacagaaccacagtttagagtgaagcctgctggtgtatca
gacatcatgtgggcggaggcaatggggaagcttgaaggtatggacagtgcagatagagaa
cgtctgtggccacagcttgtccagggttttaaggatctttcgcaacgccttaagatacaa
gatgaagtcattgtttctgatgcagagagattgcgtataacccaaagcaatgttaaaatg
ctccaaagacattttcaggctgatactcttccatggattcaaagactaaaacaaaaggaa
caaattctccagcaacgtcttttaagagtaatgagagtagtggaggcattggagggaaaa
ggctgccgcatacccttaacgaaaggggaagctgaacttgctgagaaattagccacaata
actagacagcttaaaggatctggagcggaactgtctagaagggtacaaaatctactgact
gtatctcgtgttaaagctaatagcaatggatttggtggctccgtttaccttccaggttcg
accaaaattcatgatcaaagtcttgctgacctacaggaggttttacaacagcaaatggag
gccattgcaagacttggcggtgttctgaaacgagatatacggaatatggagattatgatc
actgatgacacaggaagaattgaaaatgagaatttaatttga
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