Vigna angularis (adzuki bean): 108319314
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Entry
108319314 CDS
T04660
Name
(RefSeq) uncharacterized protein LOC108319314 isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108319314
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108319314
5.6.2.5 RNA 5'-3' helicase
108319314
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108319314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
UvrD_C_2
AAA_16
ATPase_2
Motif
Other DBs
NCBI-GeneID:
108319314
NCBI-ProteinID:
XP_052724252
LinkDB
All DBs
Position
9:complement(3189849..3197755)
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AA seq
1391 aa
AA seq
DB search
MGSRGRPLFDLNEPPAEDNDDRDGIVCIQPQKTHPSANPHASELFATSTASQGIVNNHAF
SHASSVSGFQPFVRPKSTGVPESDAELKRAGDQDTKVSSKSSKDEDVKVIDSLIQSSTNA
QPTEREEGEWSDEDVFANANGGNNANANGGSNANANVGNNLPQRSQASEEVAASGMVDGG
VVVASDGKHRNLKSSDSINDEKGSHASIGLESNSSEQKSNSIPNSESNIKSETSTDALEE
PALVPKQKEVKGIEASHALRCANNPGKRKIDQRKEEMLGKKRNRQTMFLNLEDVKQAGPI
KTSTPRRQNFSSSVVSRTIKEVRTIPAQVERVGIAKDQKLTETTSGEGSNHAEAHEPKSD
CNGDTTGPLVRSRRLNSETEPPAEANLPPIPRQGSWKQLTDSRQQKNTLHSNRKLGLSGQ
SSNDVKLGNKKHLSIKKQTPINNQSQDTSVERLIREVTSEKFWHHPEDTELQCVPGRFES
VEEYVRVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERGWYDVKVLPVH
EFKWSFKEGDVAILSSPRPGSVRSKQNNLSVAQDDGESEVTGRVVGTVRRHIPIDTRDPP
GAILHYYVGDSYDPSRVDDDHIIRKLLSGSIWYLTVLGSLATTQREYVALHAFRRLNLQM
QSAILQPSPEHFPKYEQQTPAMPECFTQNFVEYLRRTFNEPQLAAIQWAATHTAAGTSSG
STKRQEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQVNEIN
SDNVPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLARVLDRGFIDGEM
KVYRPDVARVGVDSQTRAAQAVSVERRTEQLLIKSREEIMGWMHQLKNREAQLTQQLHCL
HRDLNAAAAAVRSQGSVGVDPDLLMARDQNRDALLQSLAAVVENRDKVLVEMSRLALLES
RFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASE
VAILPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYR
MHPHIRDFPSRYFYQGRLTDSESVAKLPDEPYYKDPLLKPYLFYDIRHGRESHRGGSVSY
QNIHEAQFCLRLYEHVQKTVKSLGLGKITVGIITPYKLQLKCLQREFDEVLNSEEGKDLY
INTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALVQSE
DWAALINDAKSRNCYMDMDSLPKDFLVSKGPVYTSLPGKPSSNMRGMRSGGPRYRSMDMH
MMESRLGAPSEDDENMGAPIGSRNGNHRQSRFSMENSIDDFDHGGDKSRDAWQYGIQKKQ
NSSGPMGKRDV
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcgaggaaggccattatttgatctcaatgaaccgcctgcagaggataatgat
gatagagatggtattgtctgcatccagccccaaaagacacacccatcggcaaatccccat
gcttctgaattatttgcaacatcaactgcatcccaaggaatagtaaataatcatgctttt
tcacatgcctcatctgtctctggatttcaaccttttgttcggcctaaatccactggtgtg
cctgaatcagatgctgaattgaagagagcaggagaccaggacacaaaagtttcctcaaag
tcaagtaaagatgaagatgtgaaggttatagattcactgattcaaagttcaacaaatgcc
caacctactgagagggaagaaggggaatggtctgatgaggacgtgtttgctaatgcaaat
ggaggtaataatgctaatgcaaatggaggtagtaatgctaatgcaaatgtagggaataat
ttgccacagcgaagtcaagcttcagaagaggtagcagcatctggaatggtggatgggggt
gttgtggttgcttctgacggtaagcatagaaatcttaagagttctgatagtataaatgat
gaaaagggtagtcatgcttctataggtctagaatcaaattcgagtgagcagaaaagcaat
agtattccaaattcagaaagcaatataaaaagtgaaacctctactgatgcactggaggaa
cccgctttagttcccaagcaaaaagaagtgaaaggtattgaagcaagtcatgcgcttagg
tgtgcaaataatccagggaagaggaagattgaccaacgtaaagaggaaatgttgggaaag
aaacgtaatagacagacaatgtttcttaacttagaggatgttaagcaagcaggtcctatt
aaaacctcaacccctagaaggcagaatttctcgtcatctgttgtaagtcgtacaataaag
gaagtccgcactattcctgcacaagttgagcgtgttggaatagctaaggatcagaagctc
actgagactacttctggtgaaggtagcaaccatgctgaagcacacgaacctaaatctgat
tgtaatggcgatactactggaccacttgttagatccaggaggttaaacagtgagacagaa
cctcctgcagaggccaatttaccacccattccgagacagggttcatggaaacaattgaca
gattcaaggcagcagaaaaacactctccattctaataggaagttgggattgagtggtcaa
agttccaatgatgttaagttaggaaacaagaaacatctttctatcaagaagcagactcct
atcaacaaccagtcccaggacacatctgttgaacgtcttatacgggaggtgaccagtgaa
aagttttggcatcacccagaggatactgagcttcagtgtgttcctggacggtttgaatca
gtggaagagtatgttagagtatttgaacctttgctttttgaggaatgccgtgctcaactt
tacagtacttgggaagagtcaacagaaacagtgtcaagggatactcatattatggtgcga
gtgaaggcgaatgagtcaagggaaagagggtggtatgatgttaaagttcttccagtacat
gagttcaaatggtcatttaaggagggtgatgttgcaattctttcatcccccaggcctgga
tcagttagatccaagcagaacaatttatctgtagctcaggatgacggggaatctgaagtc
acgggacgagtggttggtacggttaggcgtcacatacctattgatacccgtgatcctcct
ggtgctattcttcattactatgttggagactcttatgatcccagcagggttgatgatgac
catatcataagaaagcttctaagtggaagcatctggtacctcaccgttcttggttctctt
gccaccacacaacgggagtatgttgccctacatgcatttcgtcgattaaatttgcagatg
caaagtgcaatccttcagcctagtcccgaacacttccctaaatacgagcaacagacccca
gccatgcccgaatgcttcacacagaactttgttgagtatctacgtaggaccttcaatgaa
ccccagttggcagcaatccaatgggcagctacccacacagctgctggcacaagtagtgga
tcaactaaaaggcaagaaccttggccatttacccttgttcaaggacctccaggaacagga
aaaacacatacagtgtggggaatgttgaatgtcattcaccttgttcagtatcagcactac
tacacctctttactaaagcatgtggcccctgagagctacaagcaagtcaatgagattaat
tcagataatgtccccactggatctattgatgaagttcttcaaaacatggaccagaatctc
ttgcgaaccttacctaaactggtcccaaaacctagaatgttagtctgtgctccatctaat
gctgccactgatgagcttcttgctcgtgttctggatcgtggatttattgatggggagatg
aaagtttatcgaccagatgtggctcgagtaggggttgattctcagacacgtgctgcccaa
gcagtatctgttgagcgtagaactgaacagcttttaatcaagagtcgggaagaaattatg
ggatggatgcaccagttaaagaatcgtgaggcacagctgactcagcagttgcattgtctc
cacagagatcttaatgctgctgctgctgctgttcgttcccaaggatctgttggtgttgat
cctgaccttctcatggcccgagatcagaatcgagatgctttgctacagagccttgctgct
gtggttgaaaaccgggacaaggttttggttgagatgtctcgcctagcccttcttgaaagt
aggtttcgacctggtagtggatttaatttggaagaagcccgtgctagtttggaggccagt
tttgcaaacgaagcagagattgttttcactacagtttctagcagtggccggaagttgttt
tctcgcctttcccatggttttgatatggtggtcattgatgaggcagcccaagccagtgag
gtggcaattctgcctcccctctctctcggtgcagctcgatgtgttcttgttggagatcct
cagcagcttcctgctacagttataagcaaggctgctggaacattgatgtacagtaggagt
ctttttgaaaggttccagcaagcaggttgcccgacaatgttgctgtctgtgcagtataga
atgcaccctcatattcgggatttcccttctaggtacttctatcaggggcgccttaccgat
agtgaaagcgtggctaaactgcctgacgagccatactacaaggaccctttacttaaacct
tacctattctatgatatcagacacgggcgcgagtctcacagaggtggatcagtctcttat
caaaacatacatgaagcacaattttgtctcagattgtatgagcatgttcagaagacagtc
aaatctctgggtctaggaaaaattactgttggcataattactccatataagctgcaattg
aaatgcctccagcgtgagtttgacgaagtcttaaattcagaagaagggaaggatctatat
atcaatacagtagatgctttccaaggtcaagaacgagatgtcattataatgtcctgtgtg
cgtgcatctagtcacggtgttggttttgttgcagatattcgtcggatgaatgttgccctt
acacgtgcaagaagggccctttgggtcatgggaaatgcgaatgctctggtgcaatctgaa
gattgggctgcattgattaatgatgctaaatctcgaaattgctatatggatatggactct
cttcctaaagacttcctggtgtccaagggacctgtttacacatcattgcccggtaagcct
tcatcaaatatgaggggcatgagatcaggtggaccaagatatagatcaatggatatgcat
atgatggagtccaggttgggagcaccatctgaagatgacgagaatatgggtgctccaatt
ggctcgagaaatgggaaccatcgccaatcacggttttcaatggagaactccatagatgat
tttgatcacgggggtgacaaatccagagatgcttggcagtatggtatacagaagaagcag
aactcatctggacccatgggaaagagagacgtataa
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