KEGG   Vigna angularis (adzuki bean): 108319385
Entry
108319385         CDS       T04660                                 
Name
(RefSeq) sm-like protein LSM5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03018  RNA degradation
var03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108319385
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108319385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:var03019]
    108319385
   03041 Spliceosome [BR:var03041]
    108319385
Messenger RNA biogenesis [BR:var03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108319385
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     108319385
Spliceosome [BR:var03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    108319385
SSDB
Motif
Pfam: LSM DUF7452 Ntox4
Other DBs
NCBI-GeneID: 108319385
NCBI-ProteinID: XP_017405988
UniProt: A0A0L9T5R1
LinkDB
Position
1:45875045..45876980
AA seq 87 aa
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGR
RITKLDQILLNGNNIAILVPGGSPESE
NT seq 264 nt   +upstreamnt  +downstreamnt
atggctaataatccgtcacagcttctcccatctgagttgattgatcggtgtataggatcg
aaaatttgggtgataatgaagggtgacaaggagcttgttggtactcttcgaggctttgat
gtttatgtcaacatggtacttgaagatgttaccgaatacgagatcacgtctgaagggaga
cggataaccaagcttgatcagattttactcaatggaaacaacattgccatattggtccct
ggtggttcacctgagtctgaatga

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