Vigna angularis (adzuki bean): 108319887
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Entry
108319887 CDS
T04660
Name
(RefSeq) protein CHROMATIN REMODELING 25 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108319887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108319887
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108319887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
HDA2-3
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
108319887
NCBI-ProteinID:
XP_017406675
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Position
10:complement(105497..117740)
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AA seq
906 aa
AA seq
DB search
MEENEMVWCSSDSCSSDSGEEDIEERKSDSCYSDSGEEDIEERKSQNVDAVVRGNLVVKR
QSLLPRLLSVSQGAVVCRKPFKPPSSKTHASTYNQDLTRRLSARKRFVPWGSSSPIPRPA
ISDFQFNVSVTDVDVPVSEEPKPSLPPGIDPLVLWHPQDSHDDPSNTNFTTITVDPLLVR
YLRPHQREGVQFMFDCVSGLCTTPNIHGCILADDMGLGKTLQSITLLYTLLCQGFDGKPL
VRKSIIVTPTSLVSNWEAEIKKWVGERVRLVALCESSREDVVSAIDSFTNPETNLQVLIV
SYETFRMHSSKFSSSDSCDLLICDEAHRLKNDQTITNRALAALPCKRRILLSGTPLQNDL
EEFFAMVNFTNPGILGSIAHFRRYYEAPIICGREPAATVEEKKIGAERSAELSVNVNRFI
LRRTNALLSNHLPPKIVEVVCCKLTPLQSDLYKHFIQSKNVKRAITEELKQSKILAYITA
LKKLCNHPKLIYDTIRSGSPGTSGFEECIRFFPPEMLSGRSGSWTGGHGAWVELSGKMHV
LARLLAHLRHRTNDRIVLVSNYTQTLDLFAQLCRERRYPHLRLDGSTSISKRQKLVNCFN
DLSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYR
FLSAGTIEEKVYQRQMSKEGLQKVIQQEQTDSLVSQGNFLSTEDLRDLFTFHENIKSEIH
EKMRCSRCETHGGPQSTDAQSTAANESGEENSDIGGFAEIAGCLQNLKRSEKQVGSPLEE
DLGSWGHHFLPNSVPDATLQASAGDEVTFVFTNQVNGRLVPIESKMSPKLQKKEPNKELL
KSMPTPISLQNRLPLQSASGVASMSSSTPNVNSMGIRKNISNYSLVSKVLPHKRSRPADI
SYSNFK
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaatgaaatggtttggtgttcctctgattcttgttcttctgattcgggagag
gaagatatcgaagaacggaaatctgattcttgttattctgattcgggagaggaagatatc
gaagaacggaaatcgcagaacgtggatgcagtagtaaggggtaatcttgtcgtgaagaga
cagtcgctgctaccgcggcttctttcagtatcgcaaggggcggtcgtgtgtagaaaaccc
tttaaacctccatcttccaaaactcatgcttccacttacaatcaagacctcactcgtagg
ctttccgctcgcaaaaggtttgttccctggggttcttcctctcctattcctagacctgcg
atctccgacttccaattcaacgtatcggtaactgatgttgatgttcctgtttctgaggag
ccgaaaccatctctgcccccggggatcgaccctttagtactgtggcaccctcaagactcc
cacgatgacccctctaatactaattttaccaccattacagttgaccctttacttgttcgt
taccttcgtccacatcagagagaaggggttcagttcatgtttgattgtgtctctggtctg
tgtaccacaccaaatatacatggatgcattttggcagatgatatgggtctggggaagaca
ttgcagtccatcacattactatatactctactttgtcaagggtttgatggcaagccattg
gttcgaaaatctatcatagtgactcctaccagccttgtcagtaattgggaagctgaaata
aaaaagtgggttggtgaaagagttcgtcttgtcgctctatgtgagagttcaagagaagat
gttgtctctgctattgacagttttacaaatcccgaaacaaatttacaggttctcattgtt
tcatatgagacattccgaatgcattcttcaaagtttagctctagtgactcatgtgacctt
ctcatatgtgatgaggctcacagattgaaaaatgatcaaacgataacaaacagggcattg
gcagctcttccctgcaagcgaagaattttattgtcaggaactcccttacaaaatgattta
gaagaattctttgcaatggttaactttaccaaccctggaatattgggcagtattgcacat
tttcgacgttactatgaggcaccaattatttgtggaagagaacctgctgccactgttgaa
gagaagaagataggtgctgaacgctctgctgaattaagtgtcaatgttaataggttcata
ttaagaaggactaatgcattgttatcaaatcacttgccacctaagatagttgaagttgtt
tgctgcaagttgactccactacagtcagacctatataaacattttatacaatcgaaaaat
gtgaagagggcaattactgaagaactgaagcaatcaaagattttggcctacataacagct
ctcaaaaaattgtgcaatcatccaaagcttatctatgataccatacgaagtggcagccca
ggaacttcaggttttgaggagtgtatccgattcttccctcctgaaatgttatctggaagg
tctggctcgtggaccggaggacatggagcatgggttgaactatccgggaaaatgcatgtc
ttggcaagattacttgctcatttacgtcacagaactaatgaccgcattgtccttgtctca
aactacactcagactcttgatctttttgctcaattgtgccgcgaacgaaggtaccctcat
ttgaggcttgatggctccacgtcaattagtaaaaggcagaagttggtcaactgctttaat
gatttatcgaaggacgaatttgtttttctcttaagcagcaaggctggtggttgtggacta
aatttgatcggtggaaatcgacttgtcttgtttgatcctgattggaacccagcaaatgat
aaacaagctgcagcaagagtatggagggatggacagaagaaaagagtttatatttataga
tttttgagtgctggaactatagaagaaaaggtttaccagcgtcagatgtcaaaagaaggg
ctgcaaaaggtcattcagcaagagcaaactgatagccttgtgtcacagggtaactttctt
tcaacagaggatcttcgtgatttgtttacttttcatgaaaacatcaagtcagagattcat
gaaaagatgcgatgcagtcgatgtgaaacacatggtggtcctcaaagcactgatgcccaa
tcaacagcagctaatgaatctggagaagaaaactccgatataggtggatttgcagaaatt
gctggctgcttacagaatttaaaaagatcagaaaagcaggtagggagcccattggaagaa
gatttaggaagttggggccatcactttttacctaattcagtaccagatgccacccttcag
gcttcagctggtgatgaggtgacttttgtcttcacaaaccaagttaacggacgactggta
cccatcgagtctaagatgagtcccaagctacagaaaaaggaaccaaataaggaattactc
aaatcaatgcccactcctatttctttgcagaacagattaccgctgcagtctgcttctggt
gttgccagtatgtcatcatccactcccaatgtaaattctatggggattagaaaaaacatc
tccaattactctcttgttagtaaagtattaccacacaaaagatcacgtcctgctgatatc
agttatagtaattttaagtaa
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