Vigna angularis (adzuki bean): 108320766
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Entry
108320766 CDS
T04660
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL33 isoform X1
KO
K12900
serine/arginine-rich splicing factor 10
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108320766
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
var01009
]
108320766
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108320766
Protein phosphatases and associated proteins [BR:
var01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108320766
Spliceosome [BR:
var03041
]
Common components
Common spliceosomal components
SR proteins
108320766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
108320766
NCBI-ProteinID:
XP_017407780
UniProt:
A0A8T0L5W4
LinkDB
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Position
2:complement(52782019..52785183)
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AA seq
250 aa
AA seq
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MRGRSYSPSPPRYSRRGGGRSPSPRGRYPPRPRQPDLPTSLLVRNLRHDCRPEDLRRPFG
QFGPLKDIYLPKDYYSGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRK
KPTEMRSRERRGRFYDRRRSPPRYSRSPRNSRSPPPRHRSRSRSRDYYSPAKRRDYSRSL
SPEDRRYSRERSYSPQSRERSYSRSPAYNGGSRSRSHSPAKGPTRSRSPSPDHDVKEPAR
GKPVFGIHNA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaaggagctatagtccttcgcctccgcgttacagcagaagaggcggagggagg
agtcccagccctagaggccgctaccctccccgcccccgacaaccagatcttcctaccagc
cttcttgttcgtaaccttcgccacgactgcaggcccgaggatcttcgcagaccattcggt
caatttggtcctctgaaggacatttacctgcctaaggattactactctggagaacctcgt
gggtttggttttgtccaatacgtcgatcctgctgatgcagccgatgctaaatatcatatg
gatggccaaattcttcttggtcgggagctcactgtcgtctttgccgaggagaatagaaag
aagccaactgagatgaggtcaagagaaagaaggggtcgattttatgatcgaaggaggtct
cctcctcgttactctcgttcaccccgcaattctcgatctccaccgccacgccatagatct
cgttctcggagtcgtgactattattcccctgccaaacgaagggattattctagatctctc
tcccctgaggacagacgatacagtcgagaaagatcatattcgccgcagagtagggagagg
tcatactcacgctctccagcttataatgggggctcgaggagtcgtagtcacagtcctgca
aagggtccaactcgaagcagaagtccaagtccggaccatgatgttaaggaaccagcccgt
ggtaagcctgtttttggtattcacaatgcctga
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