Vigna angularis (adzuki bean): 108320900
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Entry
108320900 CDS
T04660
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108320900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108320900
Spliceosome [BR:
var03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108320900
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
108320900
NCBI-ProteinID:
XP_017407984
UniProt:
A0A0L9TAT7
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Position
10:complement(1358947..1364148)
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AA seq
863 aa
AA seq
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MDNRVKLEKRSKDRHLERDDKYHRVSKDHHNHHSDTKHKHDHKSRDKDRDRTYDRDGSKD
RGRTYDREGSKDRDRTYDREGSRDRDRAHDSEGSKDRDKAYERESGKDRSKVKRGDGRED
LVESRYSSHSHKRKEREHSEDRDCEDKKIRVSNDRKEEKRERRKFGDKVKKEEEEDGDNN
IRGIHEGKVKEEDTEGAHGSASSKDTVFVQNGALGSVAVAPMSVLETSLAPPPPFPIKVS
LNSTTNENKGVSITRSHEVTGKSSTDGSSSTAGKAGSLSIDALAKAKKALQMQKELSEKL
KKIPQLNKSSTQNSHGSSNLGSNSQSASAVVPKGSSSASFGHVANMSIFPPAASANSPAS
GTSAAGIANATLPNLEAVRRAQELAARMGFRQDPQFAPLINMFPGQMVTDVAILQKPTKA
PVLRLDAQGREIDENGNVINVTKPTNLSTLKVNINKQKKDAYEILQPVLDVDPESNPYFD
ASMGINKTKILRPKRMNFQFVEEGKWSRDAETIKLKSKFGEAQAKEHKAKQAQLAKAKAA
PDINPNLIEITERIVIKEKPKDQIPDIEWWDVPLVHSGNYGDIDTGTIGEDKLKIENITF
LVHHPRPIEPPAEPAPPPPQPLKLTKQEQKKLRTQRRIAKEKDRQEMIRQGVIEPPKPKV
KISNLMKVLGSEATQDPTRLEKEVRSAAAEREQAHIDRNIARKLTPAELREKKQRKLFDD
PNTVETIVSLYRINDLSNPKARFRVDVNAQENRLSGRAVICDGISVVVVEGGSKSIKRYG
KLMLRRINWSDFSKEKEEDEDSDDEKPANKCVLVWQGSVAKPNFNRFTVHDCITEAAARK
VFVDAGVPHYWDQAVNYVEDEAL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggacaatagagtcaaacttgaaaagagaagcaaagatcggcacctggaacgtgatgac
aaataccatcgtgtttccaaagaccaccacaatcatcattcagatacaaaacacaagcat
gaccacaaatccagggataaggatagagatagaacttatgacagagatggaagcaaggac
aggggtagaacttatgatagagaaggaagcaaggatagagataggacttatgacagagaa
ggaagcagggatagggatagggctcatgacagtgaaggaagcaaggatagggacaaggct
tacgaaagagagagtggcaaagataggtcaaaggtgaagcgtggtgatggtagggaagat
ttggtggagtcacgatactcctcacattctcataagcggaaagagagggagcacagcgaa
gatagagactgtgaggataagaaaattagggtttctaacgataggaaggaagagaagagg
gaacggaggaaatttggggataaagtcaagaaggaggaagaagaagatggtgataataat
attagaggcattcatgagggaaaggttaaggaggaagacactgaaggtgcccatggctca
gcttcttccaaagacactgtatttgtccaaaacggtgccttgggatcagttgctgtggcg
cccatgagtgtgcttgagacatctttggctcctcctcctccatttcctatcaaggtatct
ttgaattctaccacaaatgaaaataagggcgttagtattaccaggtctcatgaggttact
ggaaaatctagtacagatgggtcatcttcaactgctggaaaagctggaagcctgtcgatt
gatgctttagctaaggctaagaaagctttacaaatgcagaaagagttgtcagaaaagctg
aagaaaattcctcagttgaataagagttctacccaaaattcacatggaagctcaaacttg
ggttcaaacagtcaatctgcctctgcagtcgtgccaaaaggttccagctcagcttctttt
ggccatgttgcaaatatgtcaatttttccccctgctgcttctgctaattctccagcaagt
ggcactagtgctgctggtattgcaaatgcaactcttcccaatttggaagctgtcaggcgg
gctcaagagcttgctgctaggatgggatttcgtcaagatccacaatttgctcctctgata
aatatgtttcctggtcagatggtaacagatgttgccattctgcaaaaaccaacaaaggcc
cctgttcttcgacttgatgctcaggggcgggaaatagatgaaaatggaaatgttattaat
gtgaccaagcccaccaaccttagcacattaaaggtcaacattaacaaacaaaagaaggat
gcatatgaaatactacaacctgtattggatgttgatcccgaatcaaatccttattttgat
gcaagtatgggtatcaacaaaacaaagatcctgcgacccaagaggatgaatttccagttt
gtggaggaaggaaaatggtcaagagatgctgaaacaataaaattgaagagtaaatttgga
gaagctcaagcaaaagagcacaaggccaaacaagcacagttggcaaaggcaaaggctgct
cctgatataaatcccaacttaatagaaataacagagagaattgtaattaaagaaaaaccc
aaggaccaaattccagacatcgagtggtgggacgtgcctcttgtgcattctggaaattat
ggagacattgatactggaaccataggtgaggataagctgaaaatagaaaatatcactttc
cttgtgcatcatcctcgtcctattgaaccacctgctgagcccgctcctccaccacctcaa
ccgctcaaactaactaagcaagagcagaagaaactccggacacaaaggagaatagccaag
gagaaagatcggcaagagatgatcagacagggtgtcatagaaccaccaaaaccaaaggtc
aagattagcaatttaatgaaagtacttggctctgaagcaactcaagatcctactcggcta
gaaaaggaggtacgcagcgcagctgctgagcgtgagcaagctcacatagataggaatatt
gcacgcaagcttactccggccgagctccgggaaaagaagcagagaaagctgtttgatgac
ccaaatacagtggagacaattgtctctctctacagaataaatgacctctcaaatccaaag
gcccgcttcagagttgatgttaatgctcaagagaaccgtttgagtgggcgtgctgtgatt
tgcgatggtatcagtgttgttgttgttgaaggtggaagcaagtcgattaagaggtatggg
aaacttatgcttagacgcattaattggagtgatttttcaaaagagaaagaagaagatgaa
gattcagatgatgaaaagcctgccaataagtgtgttcttgtgtggcaaggaagtgttgca
aaacccaacttcaataggttcactgttcatgactgcatcactgaagcagctgcccgaaaa
gtttttgtggatgccggtgttccccattattgggaccaagccgtcaactacgtagaagat
gaagccctttga
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