Vigna angularis (adzuki bean): 108320905
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Entry
108320905 CDS
T04660
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04120
Ubiquitin mediated proteolysis
var04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108320905
04120 Ubiquitin mediated proteolysis
108320905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108320905
Enzymes [BR:
var01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108320905
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108320905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_5
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
108320905
NCBI-ProteinID:
XP_017407992
UniProt:
A0A0L9TBX4
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All DBs
Position
10:1152773..1158324
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AA seq
545 aa
AA seq
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MKLKTYAGLSFIATLAIIYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVFMCILWQLT
KKIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQ
KRVEYIETTPSVPMLSHVRIVSFMGFLLLLDSLFLYSSLKHLIETWQASVSLFFCFEYMI
LATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYMCFFLVIFVNYGI
PLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTT
AKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTAAVGPQGSQADGQRQGAGTG
GESSAQNEATDNLSRHRARLQAAASAASIYEKSYVYPSANSFACSPGYTLHPPVAESTNK
DSSGGQTSGEQTQSWFLTTGGPTNESYPPMQYFHLLPSQPNAALVNYGKGFENDPNIPSS
HLEAYRKLLQCQIQILQNQLEILQKTRSDRSVDEGTSSSDSRGKSVISSSESGRAYTEEI
QDGKA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaaacttacgctggtcttagtttcattgcaactctggctattatatatcat
gcatttaacagtaggggtcaattttatccggcaatggtgtatctctcaacttccaagatc
agcttggtgcttcttctcaacatgggtttggtctttatgtgtattctatggcaattaacc
aagaagattttcttgggttccctccgtgaggcggaggttgagaggctaaacgagcaatcg
tggagggaagtcatggaaatcctctttgcaatcaccatttttaggcaagacttctctgtc
acatttcttgcgatggtcacggcattgttgttgattaaggctttgcattggttggctcag
aagagagtcgagtacatcgagaccactccttcggtgcccatgttgtcgcatgttcgaatt
gtatcttttatggggttccttcttctcttagacagccttttcttatatagttctttgaag
catctgatagaaacctggcaggcttcagtttcactattcttttgtttcgagtacatgata
ctggcaaccaccaccgtgtcaatttttgtaaagtatattttctatgttagtgacatgctt
atggagggacaatgggaaaagaaaccagtcttcactttttacctggaactcattagggac
ttgcttcacttgtctatgtatatgtgcttctttcttgtaatttttgtaaactatggtatt
cccttgcaccttatacgggagctgtatgagacgtttaggaacttcaaagtccgtgttgca
gattacatacgttatcgtaaaatcacttcaaatatgaatgatcgatttccagatgcaacc
cctgaggagcttaatgcaagtgatgcaacctgcattatctgtcgtgaagagatgactaca
gccaagaaacttatatgtggacatctttttcatgttcattgtctccgatcatggctggag
cggcagcatacatgccccacctgcagagccttggttgtaccaccagaaaatggaacaact
gcagctgtagggccgcaaggatcacaggctgatggtcaacggcaaggagctgggacaggc
ggtgaaagctcagctcaaaatgaggctacggataatttgagtagacatcgagccagactc
caagctgctgcttctgctgcttccatatatgagaagtcttatgtgtacccttctgcaaat
tcttttgcatgttctcctgggtacactctccatcctccggtggctgaatctactaataaa
gacagtagtggagggcagacttccggcgaacaaacacaaagttggtttcttaccactggt
ggaccaacaaatgaatcttatcctccaatgcaatacttccatcttctaccctcccaacca
aatgcagcccttgtcaattatggaaaggggtttgaaaatgatccaaatatcccaagctcc
catctggaagcatatagaaaactccttcaatgccagattcagattctgcaaaatcagctc
gagattctgcagaagacaaggtctgacagaagtgtagatgagggcacatcgtcatcagat
agcagaggcaagagtgtcatttcctcatctgaatctggacgtgcttatactgaggagatt
caagatggaaaagcgtaa
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