Vigna angularis (adzuki bean): 108321244
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Entry
108321244 CDS
T04660
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108321244
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
var01009
]
108321244
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108321244
Protein phosphatases and associated proteins [BR:
var01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108321244
Spliceosome [BR:
var03041
]
Common components
Common spliceosomal components
SR proteins
108321244
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108321244
NCBI-ProteinID:
XP_017408429
UniProt:
A0A8T0JL97
LinkDB
All DBs
Position
10:8264871..8267729
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AA seq
243 aa
AA seq
DB search
MADSPPRRNSRSPSPWRAQSRSRSRSRPRSRSRSRSFEKQRPRSRSRSRGRSRSRSNDRM
ETKNTGNTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFITMDNVED
ANRCIKYLNQSVLEGRYITVERSRRKRARTPTPGHYLGLKSTRDYGYRGDRGRYRGGGSG
REDYAYRGERGRSPRRSPYRGGRDYSPRHSPPPYGGRTRRDRSRSLPYSPYGSPDRRYAR
GSR
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggccgattctccgccgagaaggaattcaaggtccccttccccatggagggctcagtca
agatctaggtctagatctaggccaaggtctaggtcccggtcaagatcatttgaaaaacaa
aggccaaggtctcgctccagaagtcgtggaagatcaagatcaagaagtaatgacaggatg
gagactaaaaatacagggaatacactttacgtcactggcctatcttcaagggtcactgag
agagacctggaggagcatttctctaaagagggaaaggttgcttcgtgttttcttgtggtg
gagccccgtactcgcatttctcgaggtttcgcttttattacaatggataatgttgaggat
gcaaaccgctgcatcaaatatctcaatcaatcagttttagagggtcgctatatcactgtt
gagcggtcacgaagaaagcgtgcaagaactcctacacctggacactatcttggtctgaaa
agtactcgagactatggatatcgcggtgaccgcggaaggtatagaggaggtggatctggc
cgtgaagattatgcatatcgaggagagcgtggaaggtctccaaggcgctcaccttatcga
ggtggtagagattattctccgaggcattcaccgccaccttatggcggaagaactaggagg
gataggtccaggtcacttccatactctccatatggtagcccagacaggaggtatgctcgt
ggatctaggtga
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