Vigna angularis (adzuki bean): 108322007
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Entry
108322007 CDS
T04660
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108322007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108322007
03009 Ribosome biogenesis [BR:
var03009
]
108322007
04131 Membrane trafficking [BR:
var04131
]
108322007
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
var04147
]
108322007
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108322007
Ribosome biogenesis [BR:
var03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
108322007
Membrane trafficking [BR:
var04131
]
SNARE
SNARE associated proteins
Others
108322007
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108322007
Exosome [BR:
var04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108322007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
CDC48_2
AAA_22
AAA_14
AAA_33
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
Parvo_NS1
AAA_18
IstB_IS21
ABC_tran
Viral_helicase1
NACHT
AAA_7
NB-ARC
AAA_24
TsaE
Vps4_C
Sigma54_activat
DUF815
Zeta_toxin
Sigma54_activ_2
AAA_lid_PRS2_C
Ist1
Zot
SporV_AA
Motif
Other DBs
NCBI-GeneID:
108322007
NCBI-ProteinID:
XP_017409437
UniProt:
A0A0L9TEM2
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All DBs
Position
5:33484273..33488976
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AA seq
800 aa
AA seq
DB search
MSHHAESSDSKSEKKDFSTAILERKKSPNRLVIDEAVTDDNSVVSMHPETMEKNKLFNGD
TILIKGKKRRDTVCIVLANEKCEEAKLRMNKVVRSNLRVRLGDVVSVYCSDVPYGKRVHI
LPIDDTIEGLTGNLFDSYLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPGECCVV
APDTEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSMDPAL
RRFGRFDREIDIGVPDEVGRLEVLRIHTKNIKLSDDVDLERISKDTHGYVGADLAALCTE
AALQCIREKMDVIDLEDESIDAEILNSMAVSNEHFLTSLGTSNPSALRETVVEVPNVSWA
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAA
DRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIF
KACMRKSPVSKEVDLGALAKYTKGFSGADITEICQRACKYAIRENIEKDIEQEKKRRESP
GAMDEDNEEDVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSDFRFPEA
GGSDPFATSAAGAEEDDLYS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccatgctgaatcgtccgactcgaaatctgagaagaaagacttctcgacagcg
attctggagcggaaaaaatctcctaaccgattggtgatcgacgaagcggttaccgatgat
aactcagtggtttccatgcatcctgaaaccatggagaaaaataaactttttaacggagat
actatcctcatcaagggaaagaaacgtagggacacggtttgcattgttctggcaaacgag
aaatgtgaggaagcgaagttaaggatgaataaagttgtgaggtcgaatttgagggttcgt
cttggagatgttgtgtctgtctattgctctgatgttccgtatgggaagcgtgtccacatt
cttcccattgatgataccattgaaggtctcacaggcaatctctttgattcatatttgaaa
ccatatttcttggaggcttatcgtcctctgagaaagggagatctattcctggttcgagga
gggatgagaagtgtagagtttaaggtcattgaaactgatcctggggagtgttgtgtggtt
gctccagacactgaaatattctgtgagggggaacctgtgaaaagagaggatgaagaaagg
ctggatgatgttgggtatgatgatgtgggtggcgtcaggaagcaaatggcacagattcgt
gagttggtagagcttcctcttaggcatccacaactttttaaatcgattggagtgaaacca
cccaaaggaattctgctgtatggacccccaggatctggtaagaccttgatagcaagagct
gttgctaatgagactggagcgttcttcttttgtatcaatggaccagagattatgtccaaa
ctggctggagagagtgaaagcaaccttaggaaagcatttgaagaagctgaaaagaatgcc
ccctccatcatatttattgatgagattgattctattgcacccaagcgagagaaaacacat
ggtgaagttgaaaggaggattgtttctcaacttttgactcttatggatggattgaaatct
cgtgcacatgttattgttattggagctacgaatcggccaaatagcatggaccctgcattg
agaaggtttggtagatttgatagggaaattgatattggtgttcctgatgaagttgggaga
cttgaagtccttcgcatacataccaaaaacatcaagctttcagatgatgttgatttagag
agaatatcaaaagatactcatggatatgttggtgccgaccttgctgccctttgcactgaa
gctgctctgcaatgcatccgggagaagatggatgtcattgatttggaagatgagagcatt
gatgctgaaatactgaattctatggcagtttcaaatgaacatttccttacttctttagga
actagcaatccatctgctttacgtgaaactgttgtcgaggtgcccaatgtcagttgggca
gatattggaggtcttgagaatgtcaagcgtgagctgcaagagactgttcaatatcctgtg
gagcaccctgaaaaatttgagaaatttggtatgtcaccatcaaaaggagttctgttctat
ggtcctcctggatgtgggaaaactttgttagccaaagcaattgctaatgaatgtcaagct
aacttcatcagcgtgaaaggcccagaattgctcactatgtggtttggtgaaagtgaggcc
aacgttcgagaaatttttgacaaggccagacaatcagctccatgtgtcctcttctttgac
gagcttgattctattgctacccagagaggaagtagtgttggggatgccggtggagctgct
gatagagttctgaatcaacttctcactgaaatggatggcatgtctgctaaaaagactgtg
ttcataattggggcaaccaacagacctgacatcattgacccagctcttctacggcctggc
cgtctagatcaactgatatatattcctctccctgatgaagaatcccgttatcaaattttc
aaggcatgcatgaggaagtcacctgtctcaaaagaggttgatttgggagcactagctaag
tatactaaaggctttagtggtgctgacataacagagatatgccagcgggcatgcaaatat
gctattagagaaaacatagaaaaggacatagagcaggagaagaagagaagagaaagccct
ggggccatggatgaagacaacgaagaagatgttgcagagatcaaggctgctcattttgaa
gagtcaatgaagtttgcgcgtaggagtgttagtgatgctgatatacgtaaataccaggca
tttgctcagaccttacaacaatcccgtggctttggaagtgattttaggtttccagaggct
ggtggatctgacccctttgcaacttctgctgctggggccgaagaagatgatctgtatagt
tag
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