Vigna angularis (adzuki bean): 108322348
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Entry
108322348 CDS
T04660
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108322348
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108322348
Spliceosome [BR:
var03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108322348
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
IstB_IS21
Astro_capsid_p
GOLD_2
Motif
Other DBs
NCBI-GeneID:
108322348
NCBI-ProteinID:
XP_017409900
UniProt:
A0A0L9TGF0
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All DBs
Position
10:complement(22471761..22478739)
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AA seq
1166 aa
AA seq
DB search
MATNTHFILTLQPRYPFSLSSSSFPFLPTNTALSFSHLRFGSLPLSLNFRASFSFKSPTS
TISAFSDAEEDEEEEEEDEEDEEEEDEDDDVAADDYDDVSADASKDDAGVFARHDGFKWQ
RVEKLCNEVREFGADIIDVEELASIYDFRIDKFQRQAILAFLRGSSVVVSAPTSSGKTLI
AEAAAVATVARGRRIFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAQVLIMT
TEILRNMLYQSVGNVSSRSGLVNVDVIVLDEVHYLSDISRGTVWEEIVIYCPKVVQLICL
SATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSMKNSLFPLLDEKGMQMNRKLSF
NYLQLQAAGAKPYKDDWSRKRNSRKRGTRFSYDSDDSMFEQRSLSKNDINAIRRSQVPQV
IDTLWQLQSRDMLPAIWFIFSRKGCDAAVQYLESCKLLDECESSEVELALKKFRKLYPDA
VRESAVRGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVIS
SLSKRGDSGRIALSSNELLQMAGRAGRRGIDESGHVVLIQTTDEGAEEGCKVLFAGLEPL
VSQFTASYGMVLNLLAGVKAIQWSNESGNMKPSTGRTLEEARKLVEQSFGNYVSSNVMLA
AKEELNKIEKEIELLMSETTDEAIDGKTRKALAPRQYKEIAELLEDLRSEKRVRTKLRKQ
MEAKRMSALKPLLEETESGHLPFLCLQYRDAEGVEHSIPAVFLGKVDSLNASKLKTMISS
VDSFALNLAEAEPSVADSALNKDIKPSYHVALGSDNTWYLFTEKWIKTVYGTGFPNVPLG
QGDARPREIMSTLLDNGDMNWDKLSQSEHGGLWFMEGSLDTWSWSLNVPVLSSLAENDEL
LLKSQDYKDAIEGYKEQRNKVARLKKKISRSEGYKEYFKIIGAVKFVEEKIKRLKNRSKR
LINRIEQIEPSGWKEFMQVSNVIHEIRALDINTHVIFPLGETAGAIRGENELWLAMVLRN
KILLDLKPAQLAAVCASLVSVGIKVRPWKNNSYIYEPSATVTKFITLLDEQRNALLALQD
KHGVTISCCLDNQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLLVQIPKLPD
IDPLLQRNAKAASAVMDRPPISELVG
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaacactcatttcatcctcacactccaaccacgttaccctttttctctttca
tcttcttctttcccatttcttccaactaacaccgctctctctttctctcaccttcgcttt
ggatctcttcctctttccctcaatttccgtgcctccttctcctttaagtcccctacctca
accattagcgcattctccgacgccgaggaggacgaagaagaggaagaagaagacgaagaa
gacgaagaagaagaagatgaagacgacgacgttgctgccgacgactacgacgacgtatct
gctgatgcttccaaggacgacgctggtgtgttcgctcgccacgacggattcaagtggcag
agagtcgagaagctctgcaacgaagtcagggagttcggcgcggatatcatcgacgtcgaa
gagctggcctccatctacgattttcgtatcgacaagtttcagcggcaggcgatactggcg
tttctgagaggctcctcggtagtggtttctgctccgacgagcagcgggaagacgctgatt
gcggaagcggcagcggtggctacggttgctaggggacggcgaatattctacacgacgccg
ctcaaggcgttgtccaatcagaagtttcgggaattccgtgagacttttggtgacagtaat
gttggccttcttacgggtgattctgctgtgaacaaggatgctcaggttttgattatgacc
acggagatattgcgcaacatgttgtatcagagtgttggcaatgtttcttctagaagtgga
cttgtaaatgttgatgtgattgttttggatgaagttcattatcttagtgacatatctcgc
ggtacagtctgggaggagattgttatttattgcccaaaagtagttcaactaatttgcctg
tcagcaactgttgcaaatccagatgagttggctggctggattggtcagattcatggtaaa
actgaattggtaacatcctcaaaacgcccagttccattgacatggcatttctctatgaag
aattccttatttccacttcttgatgagaaaggaatgcaaatgaacaggaagctgtcattc
aattatttacaacttcaagctgcaggagctaaaccttacaaagatgattggtctagaaag
aggaactctcggaaaaggggaacacgctttagctatgatagtgatgatagcatgtttgaa
caacgttctctttcaaagaatgacataaatgccatacgtcgatctcaagttcctcaagta
attgatacattatggcaacttcagtccagggatatgctgccagctatttggtttattttt
agcaggaagggttgtgatgcagctgtgcaatatcttgaaagttgcaaacttttagatgag
tgtgaatcaagtgaggttgaactagccttgaagaagttccgcaagctgtatcctgatgct
gtcagagaatcagctgtaagaggacttttgcaaggggttgccgcacatcatgctggatgt
ctacctttgtggaaggcattcatagaagagttgtttcaaagaggacttgttaaagttgtt
tttgctacagaaaccctggctgctggaatcaatatgcctgccagaacagctgttatttca
tctctcagcaaaaggggtgacagtgggcgtatagcattaagctcaaatgaactgcttcag
atggctgggcgtgctggacgcagaggcattgatgagagtggtcatgtagttctcatccaa
actactgacgaaggagctgaggagggctgcaaagttctgtttgctggactagagcctcta
gtgtcacagtttactgcttcatatgggatggttttgaatcttcttgctggtgtgaaagcc
attcagtggtcaaatgaatcaggtaacatgaaaccttccacgggaagaactttggaagaa
gctaggaaattagttgagcaaagttttgggaattatgttagtagcaatgtaatgctggct
gctaaagaagaacttaataaaattgagaaagaaattgagttgctgatgtcagaaactact
gatgaagctattgatggaaaaaccaggaaggccttagcaccacggcaatacaaggaaatt
gcagaattattggaagatttaagatcagaaaagcgggttcggactaagttgcgtaaacag
atggaagcaaagagaatgtctgccctgaaacctttgttggaggagactgaaagtggacat
ttgccatttttatgcttgcagtatagagatgctgaaggagttgaacattcaattcctgct
gtatttttggggaaggttgactcccttaatgcttcaaaactcaaaactatgatttcttct
gttgattcttttgcattgaatttagcagaagcagagccaagtgttgcagattctgcactg
aataaagatattaaaccttcataccatgtggctcttggttcagataacacttggtatctt
tttacagaaaagtggattaagacagtatatgggacaggctttcctaatgttccattgggt
caaggggatgctcgacctcgagaaattatgagcaccctacttgataacggtgatatgaat
tgggataagctttctcaatccgagcatggtggtttatggttcatggaaggatctcttgat
acatggtcttggagcttgaatgttcctgttttgagtagcttggcggaaaatgacgagcta
ctactaaagtctcaagattacaaagatgccattgaaggttacaaagaacaaagaaataaa
gttgcacggttgaagaaaaagatatctcgtagtgaaggctataaagaatattttaaaatt
ataggcgcagtcaagtttgttgaggagaaaatcaagcgcctgaagaatagatctaaacgt
ttgattaataggattgaacagattgaaccctcaggttggaaggagtttatgcaggttagc
aatgtcattcatgaaatcagagctttagatatcaatacacatgtcatatttccacttggt
gaaaccgctggtgcaattcgaggagaaaatgagctatggcttgcgatggttcttcgcaat
aaaattttattagatctaaaacctgcgcagctcgctgcagtgtgcgcaagtttggtgtcc
gtggggatcaaagttcgaccctggaaaaataacagttacatttatgagccttctgcaact
gtaacaaaattcataacattattagatgaacaaagaaatgccttattggcattgcaggac
aaacatggggtgacaatctcttgctgtttggataaccagttttgcggcatggttgaggcc
tgggcttctgggttgacatggagagaaataatgatggactgtgcaatggatgatggtgat
ttagctcgtctccttcgccggaccattgatctgttagttcagattccaaagttgccagat
attgatccattgttgcagcgcaatgcaaaggctgcttctgctgtcatggaccggcctcca
ataagtgaacttgtggggtaa
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