Vigna angularis (adzuki bean): 108322606
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Entry
108322606 CDS
T04660
Name
(RefSeq) protein SUPPRESSOR OF PHYA-105 1 isoform X1
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
var00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
108322606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108322606
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
108322606
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_DCAF4
WD40_Gbeta
Beta-prop_EIPR1
Beta-prop_TEP1_C
EIF3I
Beta-prop_RIG_2nd
Pkinase
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_IFT140_1st
PK_Tyr_Ser-Thr
WD40_RFWD3
WD40_like
Motif
Other DBs
NCBI-GeneID:
108322606
NCBI-ProteinID:
XP_017410237
UniProt:
A0A8T0JTK5
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All DBs
Position
9:6519780..6526019
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AA seq
1032 aa
AA seq
DB search
MSTANGGTGTGTEEHKRKTNDSFLKNGGQQNMSRSPRLCTPIKKELSENLPNDNVIGNQD
NGMNRYVISFAGSGLPSTSLCSGLDSEHIVEKLSAAIRNYKSKNSDLVTLPHNSIQTRNQ
LTVESKYNDINREVVSKVEEQIPFRLSKVLKGKDFEVWDLKPLSGNSVNQIIISNNAHLI
SSMTQSTSSAYNYPQLIVKQTRKGKEVICEDLKDKSFGIVGGHKSLEDEKSFAAMFQSDT
LRRSNVDDDDNKPLVEETVVSGSNEINLREWLKSECHNMKKLRKIHIFKQVLELVDFAHS
QGLVLLDFWPSCFTLLCSSKIKYIGSYGQERLGNEFMTCNVTRKRPLEQNTCACQSSSTK
QQKLFEESGSSGQSHQCSFTHGFRTIVNQTDSNTIRSLESRIKDISNCQHTITKENQFMS
ATIPTIPLEEKWYCSPEMLNDGVCTLSSNIYSLGILLFELLCDIESREAHSTAMLELCHR
ILPPKFLAENPKEAGFCLWLLHPEPSSRPNARIILESEFIRESEESSSIEDVGISDDEGE
TDKLLHFLTSLKEEKMIQASKLEEQLNLLYEDIQEVERRYSFGTDSVFPLAQMKNSEVSQ
NNLHFQDSSSSDISRSIQRSFGDEERFMANISQLENSYFSTRIRVLPKDDSSIPSNDKNL
MENRWRLPQGEHANKEPRRINTSVGCLGSFFEGLCKFARYSKFEERGRLRNRDLLSSSNV
MCALSFDRDEDYMAAGGVSKKIKIFDLNAISSDSVDIQYPLVEMTNKSKLSCVCWNTNIR
NHLASTDYDGVVQMWDADTGQPLSQYMEHQKRAWSVHFSLSDPKMFASGSDDCSVKLWNI
SEKNSLGTIWNPANICCVQFSSYSTNLLFFGSADYKVYGYDLRHTKIPWCTLAGHGKAVS
YVKFIDAEAVVSASTDNSLKLWDLKKTSSSGLSSDSCVLNYKGHSNEKNFVGLSVLDGYI
ACGSESNEVYCYHKSLPVPIASHKFESIDPISGHLNSGDNSGQFVSSVCWRNKSSMLVAA
NSVGIVKLLQMV
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgcaaatggtgggaccgggactgggactgaggagcacaagagaaaaactaat
gattcttttcttaagaatgggggtcagcaaaacatgtcaaggtcacctagattgtgcaca
cctattaagaaggaattgtctgaaaatttgccaaatgacaatgtgattggtaatcaggac
aatggtatgaataggtatgtaatttcctttgctggatctggacttcctagtactagtttg
tgttctggtttagattctgaacacattgttgaaaagttgtctgctgctattaggaattat
aagagcaagaactcagatttagttactctcccacataattcaatacagacaaggaatcaa
ttgacggttgagtctaagtataatgacataaatagagaagttgtttccaaggttgaagaa
cagataccattcagattaagtaaggtacttaagggaaaggattttgaagtttgggacctg
aagcctttatctggtaatagtgtaaatcagattataatctcaaacaatgcacatcttatt
agcagtatgacccagagtacttcatctgcatataattatcctcagttgattgtaaagcaa
acaaggaagggaaaggaggttatttgtgaagatttaaaagacaaaagcttcggcattgta
ggaggacacaagagtctggaggatgagaaatcttttgcagccatgtttcaatctgataca
ctgaggagatcaaatgttgatgatgatgataataagcctttagtggaagaaactgtagtg
tctggtagcaatgaaataaacttaagagagtggctgaaatctgaatgtcataacatgaag
aaattaagaaaaattcatatatttaagcaggtattggaattggttgattttgcacactcc
caaggacttgtcttgctagacttttggccatcttgtttcaccttattgtgttcaagtaag
attaagtacattggttcatatggtcaagaacggttaggcaatgaattcatgacctgcaat
gtgactaggaaaaggcctctggaacagaatacctgtgcttgccaaagttcaagtacaaag
cagcaaaagctgtttgaagagtcaggatcttctgggcagtcgcatcaatgctcctttact
catggcttcaggacaatagtgaatcaaactgactctaacacaatccgatccttggaatca
aggattaaagatatttctaattgtcaacatactattaccaaagaaaatcagtttatgtct
gctaccattcctaccattccattagaagagaagtggtattgtagtccagaaatgctgaat
gatggagtctgcaccttgtcatctaatatttatagccttggaattcttctttttgaattg
ctgtgcgatattgaatcaagggaggcgcattcaactgcgatgttggagttgtgtcataga
atcttaccgcctaaatttctagcagaaaatccaaaggaagctggcttttgtctttggctt
ctgcatcctgaaccatcctctcgtcctaatgccaggatcattttagaatctgagtttata
cgagaatcagaggaatcaagctctatagaagatgttggaatatctgatgatgagggtgaa
acagataaattactacattttctaacttcactcaaagaagaaaagatgatacaggcttcc
aagttggaagaacagctaaatttgttgtatgaagatattcaggaggtagaaagaagatat
tcatttggtacagattcagtatttcctttggcacaaatgaaaaattcagaagtgagtcag
aacaatttgcattttcaagattcttctagttcagacatcagtagatccattcaaaggtca
tttggtgatgaagaaagatttatggctaacataagtcagctagagaattcttacttttct
acaagaatccgagtcctgccaaaagatgattcatctattccaagcaatgataaaaatctg
atggaaaatagatggagattgcctcaaggagagcatgcaaataaggagcctagaagaata
aatacttctgttggttgtctaggatccttctttgaaggtttatgcaagtttgctcgttac
agcaagtttgaagagcgtggcagattaagaaatagagatctgcttagttcttccaatgta
atgtgtgctttaagttttgaccgtgatgaagattacatggcagcaggaggagtttcaaag
aaaatcaagatttttgacctcaatgctatttcaagtgattctgttgacattcagtaccca
ttggttgagatgacaaataaatcaaagcttagctgtgtgtgctggaacaccaacattaga
aatcatctggcatctactgactatgatggtgttgttcagatgtgggacgcagacactggt
cagccattgtcccaatatatggagcaccaaaagagagcttggtctgttcatttttctctg
tcagacccaaaaatgtttgctagtggaagtgatgactgctctgtcaaactgtggaatatc
agcgagaaaaattctctgggaaccatctggaaccctgccaatatatgctgtgttcagttc
tcttcttactcaacaaatcttttattttttggatcagctgattacaaggtttatggttat
gatcttcgtcacactaagattccgtggtgcacattagctggtcatggcaaagctgttagt
tatgtaaaatttatagatgctgaagcagttgtctctgcttccactgacaactctttgaag
ctttgggacctgaagaaaaccagctcttctggtttgtcatctgattcttgtgtcttaaac
tataaaggtcatagtaatgaaaagaattttgtgggattatctgttttggatggatacatt
gcatgtggttcagaatctaatgaggtgtactgttatcacaaatcactgcccgtgccaatt
gcttctcacaaatttgagtcaattgatcctatttctggtcatctaaatagtggtgataat
agtggacagtttgtttctagtgtttgctggagaaacaaatctagcatgcttgttgcagcc
aactcagttggaattgtgaaactgttgcagatggtctga
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