Vigna angularis (adzuki bean): 108322739
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Entry
108322739 CDS
T04660
Name
(RefSeq) rRNA biogenesis protein RRP5 isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
var03009
]
108322739
Ribosome biogenesis [BR:
var03009
]
Eukaryotic type
90S particles
Other 90S particles
108322739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
Suf
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
NRDE-2
UTP6_C
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
108322739
NCBI-ProteinID:
XP_017410443
LinkDB
All DBs
Position
3:complement(41035346..41055856)
Genome browser
AA seq
1914 aa
AA seq
DB search
MAPHSKRTKNTKVSGDKPKIDNASKKKFKRKERKQNDDVAATKSETLPLQLEDEVPDFPR
GGEVFFNPRSDYDKFGGENHTRKTKKNKGRKALSKSNEAVDDWGSLSGGGITGKLPKRVH
KVTLKNITPGMKLWGVVAEVNEKDLVVSLPGGLRGLVHASDAVDPIFDDKIEVGEIFLSG
VFYVGQLVSCVVLRLDDENKEKGRRKIWLSLRLSLVHKNYNLDVVQEGMVLAAYVKSIED
HGYILHFGVSSFMGFLPKDSSTEGWGGEVKIGKLLQGLVRSIDKVRKVVYLSSDPDTMSK
SVTKDLRGLSIDLLVPGMMINARVKSILENGVMLSFLTYFTGTVDLFHLQNIYPGTNWKE
KYIQSQKVVSRILFIDPSSRSVGLTLNPHLVQNRAPPSHVKIGDIYDNSKVVRVDKGSGL
LLEVPSIPEPTPVFVNISDIAEGEIQKLEKKFKEGNHVRVRILGLRYLEGMATGVLKASA
LEEEVFTHSDVKPGMVVKAKILSVDSFGAIVQIPGGVKALCPLRHMSELEISKPGKKFKV
GAELVFRVLGCKSKRVTVTHKKTLVKSKHGIISSYTDATDGLITHGWITKIEVHGCFVRF
YNGVHGYAPRFELGLEPGADPGTVYNVGQVVKCRVVSSIPASQRINLSFIIKPTRVSEDD
VVTLGSLVSGVVDRITSTNIIVYVNASGFSRGTISTEHLADHHGQAILMNKLLKPGYNFD
QLLVLDVKGNNLILSAKSSLIKHAQQIPSDINQIQPNSVVNGYVCNLIESGCFVRFLGHL
TGFAPRNKAADDQKTNILEAYYIGQSVRSNISNVSSETGRVTLSLKQTECSSTDASFIQD
YFLMDEKIAKLQNLGSGASDLKWLEGFNIGVVAKGRVKDVTDVGLVLSFEKYSDVFGFIT
NYQLAGTILESGSEVEALVVDVAKAERLVDLTLKPEFFNSSKESSISRTNKKKRRREASK
ELVLHQTVKAVVEIVKENYMVVSIPENDYVIGYASISDYNTQRFPHKQYQNGQSVIATVM
ALPSPETLGRLLLLLSEVNETTSSKRSKKSSYKVGTLVEAEITDIKMLELKVKFGFGLHG
RIHITEVHNGNDLKNPFSSYKIGQTVTARIVAKPNETDGNRKGSQWELSVRPEMVTGSSD
IDDVSGNLEFIIGQCVAGYVSKVESEWVWLTISRNVGAQIYILDSATEPSELEDFQNRYL
VGQHVSGHVLSFNTEKKLLRLVLHPFSTLPCRTNEEPQINIMDKDLTAYVHEGDILAGRV
SKILPGVGGLLVQISPRTYGKVHFTEIADTWVDDPLSGYHEGQFVKCVVLEITHTVKGTT
HFDLSLRSSSVKLSQDSADLESVVDANGKCIEKIEDLHLDMIVKGYIKNVTPKGCFIMLS
RKVDAKILLSNLSHEYVKEPEKEFPVGKLVSGRVISVEPLSKRVEVTLRTSTVTNTSKSE
IVDFSKFHVGDIISGRIKRVESFGLFIVIDNTNMVGLCHVSEISDNQIENIEANYKAGER
VNARILKVDEERHRISLGMKNSYMTDGTLLQIASKEGSDELIEADGKKSITSMHSSLETS
NIGSDDEMNQFPILSRSQDRGDIPPLDVSLDDFDQIDVNNANSHSKEHGNEEVIIHEKNK
RREKRKAKEEREKQIRAAEERLLEEDVPRTADEFEKLIRSSPNSSFIWINYMDFMISMAD
VEKARSIAERALMTINVREENEKLNIWKAYFNLENKYGNPREEAVMKVFHRALQYNDPKK
VYLALLGMYERTEQHNLADELLNKMAKKFKHSCKVWLRRVQSLLKQNQDGIQPLIDRASL
CLPKHKHIKFFSQTAILEFKVGVPDRGRSLFEKILREYPKRTDLWSVYLDQEIQHKDEDI
IRALFERAVSLSLPPKKMKFLFKKYLDYEKSQGDDERIESVKRKAMEYVESTMS
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgcattctaagagaacgaagaacacgaaggtgtcaggagacaaaccgaaaata
gataacgcctcaaagaaaaaatttaaacggaaggagaggaagcaaaacgacgacgtcgcc
gccactaagtcggaaacactacctttgcagctagaagacgaggttcccgatttccctcga
ggtggagaagttttttttaatccaaggagtgattatgataaatttggtggcgagaatcac
acgagaaagacgaagaagaataagggaagaaaggctttgagtaagagtaatgaggctgta
gatgattggggctcgctttctggtgggggtatcaccggaaagttgccaaagcgcgtgcat
aaagttactctcaagaatataactcctggaatgaagctttggggagttgttgctgaagta
aatgagaaggatcttgtagttagcttaccaggcggtttacgtggtttggtacacgcatca
gatgcagtggatcctatttttgatgacaagattgaggttggggaaattttcctttctggt
gttttttatgttgggcaactggtttcttgtgttgtactgagattggatgatgaaaacaaa
gaaaaaggaagaaggaaaatttggctttctttgcgtctttcattggtgcacaagaactac
aacttggatgttgttcaggaaggcatggtccttgctgcatatgtgaaaagcattgaagat
catggttacattcttcattttggtgtgtcttctttcatgggattcctaccaaaagacagc
tctactgaaggctggggcggtgaagtaaaaattggaaaacttctgcagggtttggttagg
agcattgataaagttcgtaaagttgtttacctgagttctgatcctgatacaatgtccaaa
agtgtgacaaaagatctcagaggtttatcaattgatcttctagttccaggaatgatgata
aatgcccgtgtgaagtcaatccttgagaatggtgttatgttatcgtttctcacatacttc
actggaactgttgatctgtttcatttgcaaaatatttatcctggaacaaactggaaggag
aaatacattcaatctcagaaggttgtttctcgaatattattcattgatccatcaagtaga
tctgttggtttgacgctgaatccacatcttgttcagaacagagcccctccttctcatgtt
aaaattggagatatatatgacaactcaaaggttgtaagggtggataaaggatctggacta
ttgcttgaagttccatcaattccggagccaactcctgtttttgtcaatatatcagatatt
gcggaaggggagatccaaaaactcgagaagaagttcaaggaaggaaatcatgttcgagtt
cgaattcttgggttaagatatttggaaggaatggcaacaggagttttgaaggctagtgct
ttggaagaggaagtgtttactcattctgatgtcaagccaggcatggtggtgaaggctaag
atactttcagttgatagctttggtgctatagtgcaaattccaggtggtgtgaaggctctt
tgtccgcttcgacatatgtctgaattggaaatttcaaagcctggaaaaaaatttaaggtg
ggagctgaattggttttccgagtgctcggttgcaagtcgaagagagtgacggttacacac
aagaaaacccttgtgaaatcgaaacatgggattattagctcatatactgatgcaactgat
ggtttgataacccatggatggataacaaaaattgaagttcatggatgctttgtacggttt
tacaatggggtgcatggatatgctcctagatttgaacttggattagagccaggtgctgat
ccaggtactgtgtacaatgttggacaagttgtcaaatgccgggtagtaagttcaattcct
gcttcacagaggatcaaccttagtttcataataaaacccacaagggtgtcggaagatgat
gtagttaccttgggcagccttgtttcaggagttgttgacagaattacatccactaatata
attgtttatgtcaatgcaagtggtttctcaaggggtacaatatccacagagcacttggca
gatcatcatgggcaagctattctgatgaacaaactattgaaacccggatataattttgat
caactgctggtcctagatgttaagggaaacaatttgattctgtctgccaaaagctctctt
attaaacatgctcagcagattccttcagatatcaatcagattcagcctaactctgttgtg
aatggctatgtatgtaacttaattgagtctggctgctttgttcgtttccttggtcattta
actggctttgctccaagaaataaggctgctgatgaccagaaaaccaatattttggaagcc
tattacattgggcaatcagttcgcagcaacatatccaatgttagtagtgaaactggtaga
gtaacgctatctctaaagcagacagaatgttcttcaactgatgcatcatttattcaggac
tattttctcatggatgaaaagattgccaagttgcagaatttgggctctggtgcatctgat
ttgaagtggcttgaaggatttaacattggtgtggttgcaaaagggagagttaaggatgtt
acagatgttggacttgttctaagctttgaaaagtatagtgacgtttttggttttattacc
aattatcagttggctggaactattttggagagtggctccgaagtggaagcattggttgtt
gatgttgctaaggcagaacggcttgttgatttaactctaaaaccagagttctttaatagt
tctaaagaaagttccataagtcgtactaacaagaagaaacgtagaagggaggcatccaag
gagttggtattgcatcagactgtgaaggcagttgtggaaattgtgaaagaaaattacatg
gttgtatcaattccagaaaatgattatgtgataggatatgcatctatatcggactataac
acacaaaggtttcctcataaacaataccaaaatgggcagagtgttattgcaactgttatg
gcacttccgagccctgaaacattgggaaggttgcttttacttctaagtgaggtcaatgag
accaccagttctaaaagatctaagaagtctagctataaagtgggaactctggttgaggca
gagattactgatataaaaatgcttgaactgaaagtgaagtttggatttggtctacatgga
aggattcacataacagaggtacataatggtaatgatttgaaaaatccattctctagctac
aaaatcggtcagacagtgactgcaaggattgttgcaaaacctaatgaaacagatggcaac
aggaagggctcacagtgggagctttctgtcagacctgaaatggttacaggttccagtgac
atagatgatgtatctggaaatcttgagtttataattgggcaatgtgtggctggttatgtg
agcaaagtagaaagtgaatgggtctggttaacaatatcgcgaaacgtgggggctcagata
tatattcttgatagtgctactgaacccagtgagctagaggatttccagaatagatacctt
gttgggcaacatgtttctggtcacgttctaagtttcaacacagagaagaagctactgcgg
ttggttttacaccccttctcaactcttccttgtagaacaaatgaagagccacaaattaat
attatggacaaggatttaacagcatatgttcatgaaggagatattttggctggaagggtt
agtaaaatacttccaggtgttggtggattgcttgtccaaattagtcctcgtacatatgga
aaagtacattttaccgaaattgcagacacgtgggtggatgatccactgtctggatatcat
gaagggcagtttgtcaaatgcgtagttcttgaaattactcacactgtaaagggtaccact
cattttgacttgtcattgcgatcttccagtgtgaagctttcccaggattctgcagatctt
gagagcgttgtggatgccaatggcaaatgtatagagaagattgaggatctacaccttgat
atgattgtaaagggttatattaagaatgtcacaccaaagggttgcttcattatgctctca
cgaaaggttgatgccaaaattcttctatccaatttatcgcatgaatatgttaaagaaccc
gagaaagaatttccagtgggaaaacttgtatctggcagggttatatctgtggagcctctt
tcaaaacgtgttgaagttacactgaggacatccacagttaccaatacttccaaatccgag
attgttgattttagtaaatttcatgtcggagatattatatctggcaggattaagcgggtt
gagtcatttggtttgttcatagtaattgacaacacaaacatggttggattatgccatgta
tcagaaatttctgataaccagattgagaatatcgaagcaaactataaagctggagagaga
gtaaatgcaagaatattaaaggtggatgaggaaagacacagaatttctttgggaatgaaa
aattcatatatgacggatggaactttacttcaaatagcatccaaggaaggatcggatgaa
cttattgaagcagatggaaagaagtctataacttctatgcatagttcgctggaaacctca
aatataggttctgacgatgaaatgaatcaattcccaattctttcacgatctcaagatagg
ggagacattccaccacttgacgtttctctcgatgactttgatcaaattgatgtaaataat
gctaatagtcacagtaaagagcatggaaatgaagaagtcattatacacgaaaagaataaa
aggcgtgaaaagaggaaagcaaaggaagaaagggagaagcaaataagggcagccgaggag
agattactggaggaggatgtacctagaacagccgatgagtttgaaaagctgattagaagc
tctcccaatagcagttttatctggataaattacatggatttcatgatttctatggctgat
gtggagaaagcccgctcaattgctgaaagagctctgatgaccataaatgtccgagaagag
aacgagaagcttaacatttggaaggcctactttaatttggaaaataagtatggcaaccct
agagaggaggccgttatgaaagtattccacagagctctacaatacaatgatcccaaaaag
gtctatctagcactcttgggaatgtacgagaggactgaacagcataatttagccgatgaa
cttctcaataaaatggcaaagaagttcaagcattcttgcaaagtttggttgaggcgtgta
caaagtcttttgaagcaaaaccaggatggaatccaacctctcatcgatcgagcttcgtta
tgccttcccaaacataagcatattaaatttttctctcagacagcgattcttgaattcaaa
gttggtgttccagatcgagggcgatctttgtttgaaaaaattcttcgggaatacccaaag
agaacagacctatggagtgtttatctcgatcaagaaattcaacataaagacgaagatata
attcgtgcgctgtttgaaagggctgttagtctgagtctcccacctaaaaagatgaagttc
ttgttcaaaaagtatcttgattatgagaaatcccaaggtgatgatgaacgtattgaatct
gtgaagaggaaagcaatggaatatgttgagagcactatgtcttga
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