Vigna angularis (adzuki bean): 108322996
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Entry
108322996 CDS
T04660
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
var03036
]
108322996
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
var04812
]
108322996
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
108322996
Cytoskeleton proteins [BR:
var04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
108322996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EF3_N
HEAT_EZ
Vac14_Fab1_bd
HEAT_2
Cnd1
TOR1L1_N
HEAT_Maestro
PDS5
Adaptin_N
Tti2
TTI1
INTS1_R4
TPR_TTI1_C
UTP20
MMS19_C
V-ATPase_H_N
HEAT_DAAF5
Dopey_N
Motif
Other DBs
NCBI-GeneID:
108322996
NCBI-ProteinID:
XP_017410806
LinkDB
All DBs
Position
2:42940083..42952826
Genome browser
AA seq
1471 aa
AA seq
DB search
MEEALELSRAKDTKERMAGVERLHQLLEASRKSLSSSEVTSLVDTCMDLLKDNNFRVSQG
ALQALASAAVLSGDHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSFAWAHKSWRVREEFTRTVTAAINLFASTELPLQRAILPPVLHLLNDPNPAVREAAI
LCIEEMYTQAGPQFRDELHRHNLPSSLVKDINARLEGIQPKVRSSDGIPGGYITGEIKHL
SVNPKKSSPKAKSSSRETSLFGGEGDITEKPIDPVKVYSDKELTREIEKIASTLVPEKDW
SIRIAAMQRVEGLVIGGATDYPCFRGLLKQLVGPLNTQLSDRRSSIVKQACHLLCFLSKD
LLGDFEACAEMFIPVSWPSYVGFITILMILKLLILDLITQVLFKLVVITVLVIAESADNC
IKTMLRNCKVSRVLPRIADCAKNDRNAVLRARCCEYALLVLEHWPDAPEIHRSADLYEDM
IKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFASFDPAIQRLINEEDGGIHRRHASP
SIRDRGALTSLASQTSAPSNLPGYGTSAIVAMDRSSSISSGTSISSGILLSQAKSLGKGT
ERSLESMLHASKQKVSAIESMLRGLDLSDKHNSSFRSSSLDLGVDPPSSRDPPFPAAVSA
SNHLTSSLTTESTTSGINKGSNRNGGLGLSDIITQIQASKDSAKLSYHSNVGIEPLSSIS
SYSSKRASDRLQERSSLDDNSDIRETKRFIKPNHDKQYLDAPYRDGNFRESHNSYVPNFQ
RPLLRKNVAGRMSAGRRRSFDDNQLSLGEMPNYAEGPSSLHEALSEGLSSGSDWSARVAA
FNYLHSLLQQGPKGVIEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFE
GYMERILPHVFSRLIDPKELVRQPCSTTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLA
VIEFAINSFNKHAMNPEGAANIGILKLWLAKLTPLVHDKNTKLKEAAITCIISVYSHFDS
IAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLINYLQNKKERQRSKSSYDSSDVVGTSS
EDGYVGYSRKAHYLGRYSAGSLDGDGGRKWSSQDSILVKASLGQASSGETQEHLYQNFET
DPNTGSLASKTKDLAYAVNPMGQNLASQSSQHRNVDSSINLDGLSTPRLDVNGLMLSEHL
NVAEGYVNDKEHSSELALNHHTAEDVKINSITETGPSIPQILHMVCSGGDGSPVSSKRTA
LQQLVDASISNDHSIWTKYFNQILTVVLEVLDDSDSSVKELALSLIVEMLKNQKGDMENS
VEIVIEKLLHVTKDIIPKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVICIN
CLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQ
GLNSTQLKLVTIYANRISQARTGKTIDTVQD
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcgctggaactgtcacgcgctaaggacacgaaggagaggatggcgggcgtg
gagcgcctccaccaacttctggaagcttccagaaagagcctctcgtcttccgaggtgact
tcgctcgtcgacacttgtatggatctcttgaaggacaataacttccgcgtctcgcagggc
gcgctgcaggcgctcgcctccgccgccgtcctctccggcgaccacttcaagcttcacttc
aacgcactcctccccgccgtcgtcgaccgtctcggcgacgccaaacagcctgttcgagac
gccgccaggcgcctcttgctcactctcatggaggtttcttctccaactataattgttgaa
agggcaggatcctttgcttgggcacataaaagctggagagttagagaggagtttacgcga
actgtcacagctgcaattaatttatttgcgtctactgagctcccacttcaacgggctatc
cttccccctgttttgcatttgcttaacgatccaaatcctgctgttagggaagcagctatt
ttgtgcattgaagaaatgtatacacaagctgggcctcaatttcgtgatgaacttcaccgt
cacaatcttccttcatctttggtgaaagatattaatgccaggcttgaaggaattcagcca
aaagttcgctcttcagatggtattccaggtggatatattactggggaaattaagcatttg
agtgttaatcccaagaaaagtagtccaaaggctaaaagttcctccagggagacctctctt
ttcggaggggaaggtgacatcactgagaaacccatagaccctgtgaaggtatattcagat
aaggagttaaccagggaaattgagaagattgcatctactcttgtgcctgaaaaagactgg
tcaattcgaattgctgctatgcagagagttgaaggtcttgttataggaggtgctactgat
tatccatgttttcgtgggctcttgaagcaacttgttggacctttaaacacacaattgtca
gaccgaagatctagcattgtgaagcaggcctgccatctattgtgctttttgtcaaaggat
ctcttgggtgattttgaagcatgtgccgaaatgtttataccagtaagttggcctagttat
gttggatttatcacaattttgatgattttgaaattattaattcttgatctgataactcag
gtccttttcaagctggttgtgattactgtgcttgtaattgcagagtctgcagataactgc
ataaaaacgatgttgcgcaactgcaaagtttctcgggttcttccccgtatagctgattgt
gcaaaaaatgatcgcaatgctgtacttcgtgcaaggtgttgtgaatatgctcttttggtc
ctggaacattggcctgatgcaccagaaatacatcgatccgctgatttatatgaggatatg
ataaagtgttgtgtttcagatgcaatgagtgaggttcgatctactgcaaggatgtgctac
agaatgtttgcaaaaacttggccagagcgatcgcgtcgtttatttgcatcctttgaccct
gccattcaaaggttaataaatgaagaggatggaggaatacatcggcgacatgcttcacct
tccattcgagatagaggggcactgacgtcattggctagtcagacatcggctccctctaat
ctacctggttatggaacttctgctattgttgcgatggatagaagttcaagtatatcatca
gggacatctatctcctctggtatacttctatcacaagctaagtcacttggtaagggtaca
gaacgtagtttggagagcatgttacatgcaagcaagcagaaggtttctgctattgaaagc
atgcttagaggcttggatttgtctgataagcataattcatctttccggtcatcgagtttg
gatctaggagttgaccctccatcatctcgtgatccacctttccctgctgctgtctccgca
tctaatcatctgacaagctctttaacaacagaatcaactacttctggcatcaataaaggt
agtaaccgaaatggtggtcttggtttgtctgacataatcacccagattcaagcttcaaag
gattctgccaagttgtcctatcatagcaatgttggtattgaacctttatcatcaatatca
tcatattcgagtaaaagggcctctgacagattacaagaaagaagttcacttgatgataac
agtgatattagggagactaagagatttataaaacccaaccacgataagcagtatttggat
gccccttatagagatgggaactttagggaatcacataatagttatgttcctaatttccag
agaccgcttttgagaaagaatgtggctggacgcatgtctgctggcaggaggaggagtttt
gatgataatcagctatctcttggagagatgccaaactatgcagaaggaccctcatctctt
cacgaagctttgagtgaaggacttagttcaggttctgactggtctgctagggttgctgcc
tttaattatcttcattctttgttgcagcaagggcccaagggagttattgaagttgttcag
aattttgagaaggtaatgaagttgtttttccagcacttggatgatccccatcataaagtt
gcacaagctgctctttcaacacttgcagatattgttccagcatgccgaaagccttttgaa
ggttacatggagagaatattaccccatgtgttttctcggttaattgatcctaaagaactt
gtcaggcagccatgttcaacaactttggaagttgtgagcaaaacttacagtatagattct
cttttaccggcattattacgctcgctagatgaacagaggtctccaaaggctaaattggct
gttattgaatttgcaatcaattcctttaacaaacatgctatgaatccagaaggtgctgct
aatattggcatcctaaaattatggcttgctaagttaacccctttggttcatgacaaaaat
acgaagcttaaagaagcagccattacatgcattatatcagtgtattcacactttgattcg
attgctgttcttaatttcattctgagtttgtcagttgaagaacaaaattctttgagacga
gctttaaaacaatatacccctcgcattgaagtagacctaataaactatctgcagaacaag
aaagaaagacaacgttctaagtcttcctatgattcatctgatgtggtgggaacatcctct
gaagatggatatgttggttactctaggaaggctcattaccttggaaggtattctgctgga
tcccttgatggtgatggtggcaggaaatggagttcccaggattcaatactagtgaaagct
agtcttggtcaagcatcatctggtgaaactcaggaacatctgtatcaaaattttgaaact
gatcctaatactggcagtcttgcttcaaaaactaaagatcttgcatatgcagtcaatcca
atgggtcaaaaccttgcctctcaatctagccaacatagaaatgtggacagtagcataaac
ttggatggtctttcaactcctcgtctagatgtaaatggtttgatgttatctgagcattta
aatgttgcggaaggctatgtaaatgacaaagaacattcttctgaattggcacttaatcat
cacacagccgaagatgtaaagattaactccataacagaaacaggaccaagcattcctcaa
attcttcatatggtatgcagtgggggtgatggaagccctgtttcaagtaaacgaactgca
cttcaacaattagttgatgcttctatatcaaatgatcattctatttggaccaagtacttc
aatcagattttgacagttgtgcttgaggtactggatgattcagattcctcggtcaaagag
cttgctctttcactgatagttgagatgcttaaaaatcagaaaggcgacatggagaattct
gttgagattgtaattgagaagctgcttcacgttactaaagatatcattcctaaggtctcc
aatgaagcagagcactgcttgaccattgttttatctcagtatgatccattcagatgttta
agtgtcattgtccctctgctggttactgaggatgagaaaacacttgtcatttgcataaat
tgcttaacaaagcttgtagggcggctttctcaggaggaactgatggctcagttaccctcg
tttctgcccgctctttttgaagcctttggtaaccagagtgcagatgttcgtaagaccgtt
gttttctgccttgtggatatttatatcatgcttgggaaagcattcttgccgtatttgcaa
gggcttaacagcacgcagttgaagttggtcaccatttatgcaaatcgaatctcacaagcc
aggacaggcaaaacaattgataccgttcaagattag
DBGET
integrated database retrieval system
