Vigna angularis (adzuki bean): 108323324
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Entry
108323324 CDS
T04660
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108323324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108323324
03110 Chaperones and folding catalysts [BR:
var03110
]
108323324
03029 Mitochondrial biogenesis [BR:
var03029
]
108323324
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
var04147
]
108323324
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
108323324
Messenger RNA biogenesis [BR:
var03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
108323324
Chaperones and folding catalysts [BR:
var03110
]
Heat shock proteins
HSP60 / Chaperonin
108323324
Mitochondrial biogenesis [BR:
var03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
108323324
Exosome [BR:
var04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108323324
Exosomal proteins of other body fluids (saliva and urine)
108323324
Exosomal proteins of breast cancer cells
108323324
Exosomal proteins of colorectal cancer cells
108323324
Exosomal proteins of bladder cancer cells
108323324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
AAA_lid_4
Motif
Other DBs
NCBI-GeneID:
108323324
NCBI-ProteinID:
XP_017411233
UniProt:
A0A0L9THZ9
LinkDB
All DBs
Position
9:2374637..2381097
Genome browser
AA seq
575 aa
AA seq
DB search
MYRLARKVASSSIASPSAKNLVYGRLLSSRNFVSKDINFGVGARAAILQGVTQVADAVKV
TMGPKGRNVIIDRSRGNPRITKDGVTVAKSIKFKDKEKNIGADLVKQVAKATNTAAGDGT
TCATVLTQAILTEGCKSIAAGVNVMDLRNGINKAVDAVITDLKSRALMISTPEEITQVGT
ISANGERDIGELIARAMEKVGKEGVITVVDGNTLDNELEVVEGMKLTRGYISPYFITDQK
TRKCELENPFILIHDKKISDMNSLLKILELAVTKKRPLLVVAEDVESDALAMLILNKHHA
GLKVCAIKAPGFGDSRRANLDDLATLTGGEVITEERGLSLDKVQSEMLGTARKVTVTIDD
TIVLHGGGDKKAIEERCEQLRTAMESSSAVFDKEKAQERLSKLSGGVAVFKVGGASEAEV
GERKDRVTDALNATRAAVEEGIVPGGGVALLYATKALDNLQTKNEDEKRGVQIIQNALKA
PTSTIASNAGFDGALIHSKLLEQDDHNLGFDAAKGVYVDMVKAGIIDPLKVVRTALVDAA
SVSLLLTTTEAAVVDNPHDKNKPPSRVPDMDDLDL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgattagctagaaaagtagcttcttcttccattgcttctccctccgctaagaac
ctcgtatatggtaggttgttgtcgagcagaaattttgtgagcaaagatatcaactttggg
gttggggctcgtgctgcaatcctccaaggtgtaactcaggttgctgatgctgtgaaagta
accatgggacccaagggtcgcaatgtgataattgatagaagccgtgggaatcccaggatc
acgaaggatggtgtgactgtggctaaaagtatcaaatttaaagacaaagaaaaaaatatc
ggtgctgatcttgtcaagcaggtggccaaggctaccaacactgctgctggagacggtaca
acttgtgcaactgttttgactcaggcaatactcacagaaggatgcaaatcaattgctgct
ggcgtgaatgttatggacttacgtaatggaataaataaggcagttgatgctgtaattact
gacttgaaaagcagagcattgatgataagcacaccagaagagataacccaggttggaact
atatctgcaaacggggagcgcgatattggagaattgatagcaagggcaatggagaaagtt
gggaaggagggagtcattactgttgttgatgggaatactttggataacgagttggaagtg
gtggaaggaatgaagttaaccagaggctacatatctccttattttattactgaccagaag
acccgcaaatgtgaattggagaacccctttattcttatccatgacaagaaaatttcagac
atgaattcactgctgaaaatactggagcttgcagtaacgaaaaaaagaccactcctagtt
gttgctgaagatgtagagagtgatgcactagctatgctcatactcaacaagcatcatgct
gggcttaaggtttgtgccataaaagctcctggttttggggacagtagaagggcaaatcta
gatgatcttgcaactcttaccggaggagaggtgatcacagaagagcgtggtttgtccctt
gataaagtccaatcagaaatgcttggcactgcaagaaaggttactgtcaccattgatgac
actattgttctacatggtggtggggataagaaggccattgaagagagatgtgaacaacta
cggacggctatggaaagtagttctgccgtgtttgataaagaaaaagcacaggaacgacta
tcgaaactatctggtggtgtagctgttttcaaagttggaggggctagtgaggccgaggtt
ggggaaaggaaagatagagtaacagatgctttaaatgccactagagcagctgtggaagag
ggaattgttccaggtggtggagtcgctctcttatatgctaccaaagccttggataacctt
caaactaaaaatgaggatgagaaaagaggagtacagattattcagaatgcactcaaggcg
cctacatctacaatagcttccaatgctggttttgatggtgctttgatccacagtaaattg
ttggaacaagatgatcataatttaggttttgatgccgccaaaggtgtctatgttgatatg
gtaaaggctggaataatagatcctcttaaggtcgttagaacagctttggtagatgcagcc
agtgtttcattgctactgacaacaaccgaggcagctgtggtggataatccgcatgacaaa
aataaacctcctagtcgagtgccagatatggatgatttggacctctaa
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