Vigna angularis (adzuki bean): 108323351
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Entry
108323351 CDS
T04660
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108323351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108323351
03009 Ribosome biogenesis [BR:
var03009
]
108323351
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108323351
Spliceosome [BR:
var03041
]
Complex A
U1 snRNP components
U1 related factors
108323351
Complex B
108323351
Ribosome biogenesis [BR:
var03009
]
Eukaryotic type
Pre-60S particles
Helicases
108323351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
108323351
NCBI-ProteinID:
XP_017411266
LinkDB
All DBs
Position
9:complement(2284631..2292414)
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AA seq
507 aa
AA seq
DB search
MSRYDSRSGDPTSYRDRRSDSGLGAPTGFGGSVQHSSSNRRDHDDGGSPKRNLSLDGLPH
FEKNFYIESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKTFQDAGFPEYVMQEITKAG
FTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVL
APTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLE
SNHTNLQRVTYLVLDEADRMLDMGFDPQLRKIVSQIRPDRQTLYWSATWPKEVEQLARKF
LYNPYKVIIGSEDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCD
QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVIN
YDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMG
RGAPPLPSGPRGFQDRGRGYGSSRPWS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacagccgctccggcgaccccacttcttaccgtgaccggaggagtgat
tctggcctaggtgcacctacagggtttggtggttctgtacagcactcttcgtcaaacagg
agggatcatgatgatggtggatcaccaaagaggaacctcagtttggatggtttacctcat
tttgagaaaaacttctacattgagtcacctgcagtaagggcaatgactgatgctgaggtt
aatgagtaccgacagcagagggaaataactgttgaaggccgagatatccccaagcctgtc
aagacctttcaagatgctggttttccagaatacgtgatgcaagaaattacaaaagctggg
tttactgagcctacacccattcaatctcaaggttggcccatggctttgaaggggcgtgat
ctcataggaatagctgaaacaggttcagggaagacacttgcgtacttattacctgccatt
gtgcacgttaatgctcagccgatcctagatcctggagatggacctattgtgttagtattg
gctccaactcgtgaacttgctgttcaaatacaacaagaggctactaaatttggtgcttca
tctaggattaagagtacatgcatctatggtggggttccaaagggacctcaagtgcgtgat
ctccagaaaggtgttgaaattgtaattgccactcccggaagattaattgatatgctcgaa
tcaaatcataccaacttacagagggtcacatatcttgtattggatgaagctgataggatg
ttggatatggggtttgatcctcagctgcggaagattgtttctcagatccgaccggaccgt
caaactttgtattggagtgctacttggccaaaggaggttgaacaattggcacggaagttc
ctttacaacccatacaaagtaattatagggtctgaagatttgaaagctaaccatgcaata
cgtcaatatgttgacattgtttcggaaaagcagaaatatgataaattggtgaagttgcta
gaggacatcatggatggcagccgaatactgatattcatggataccaaaaaaggatgtgat
cagatcactaggcaactccgcatggatggctggcctgcactttccattcatggagacaaa
agtcaagcagaaagagattgggtgctctcagaatttaaatcaggaaaaagtcctattatg
actgcaacagatgttgcagcccggggtttagatgtgaaggatgtaaagtatgtaataaat
tatgactttccggggtcacttgaggactatgtccatcgcattgggcggactgggagagct
ggtgcaaaaggaactgcctacacattcttcacggctgctaatgctagatttgcaaaggaa
ctaatcgctatacttgaggaagctggacagaaagtgagtcctgaattagcagcaatgggc
cgtggtgcaccacctctgccttcaggtccccgaggtttccaagaccgtgggaggggttat
ggcagttctcgtccatggagctga
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