Vigna angularis (adzuki bean): 108323372
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Entry
108323372 CDS
T04660
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
var03036
]
108323372
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
var04812
]
108323372
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
108323372
Cytoskeleton proteins [BR:
var04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
108323372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
Vac14_Fab1_bd
HEAT_2
TOR1L1_N
Adaptin_N
Cnd1
Tti2
HEAT_Maestro
UTP20
INTS1_R4
MMS19_C
HEAT_DAAF5
Npa1
V-ATPase_H_N
MMS19_N
Dopey_N
Tra1_ring
API5
Motif
Other DBs
NCBI-GeneID:
108323372
NCBI-ProteinID:
XP_017411296
UniProt:
A0A0L9TIH6
LinkDB
All DBs
Position
3:20254131..20276103
Genome browser
AA seq
1437 aa
AA seq
DB search
MDEALELARAKDAKERMAGVERLHEVLEASRRSLSSAEVTSLIECCLDLLKDSSFKVSQG
ALQALDSAAVRAGDHFKLHFNALVPAVVERLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSFAWTCKSGRIREEFARTVTSAIGLFSATELPLQRAILPPILQLLNDLNPAVREAAT
LCIEEMYSQAGSQFRDELQRHNLPSSLVKAINARLEGIQPKVQSSDGISSGYIAGEIKPV
GVNPKKSSPKAKSSSRESSLFGGEGDVTVKVIDPIKVYSEKELIREIDKIAATLVPEKDW
SIRIAAMQRIEGLVLGGATDYPCFFGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKD
LLGDFEACVELFIPVLLKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRS
AVLRARCCDYALLILEHWPDAVEIQRLADLYEDMIRCCVSDAMSEVRSTARMCYRMFAKT
WPDRSRHLFSSFDPAIQRLINEEDGGMHRRHASPSVRDRGALISITSQASAPSNLTGYGT
SAIVAMDRSSSLSSGTSITSGFLSQAKPLGKGTERSLESVLHASKQKVTAIESMLRGLDL
SDKHGSSVLRSSSLDLGVDPPSSRDPPFPAAVSTSNHLTSSLMTESTVSGANKGSNRNGG
LGLSDIITQIQASKDSGRLAYSTNVGIEPLSAYSSYSSKRASEKLQERSSVDENSDIRDT
RRYMNPNVDRQYMDTHYRDGNFRDSQNSYVPNFQRPLLRKNVAGRVSAGSRRSLDDSQLS
VGEMSIYADGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGQKGIQEIVQNFEKVM
KLFFQHLDDPHHKVAQAALSTLADIILACRKPFEGYMERMLPHVFSRLIDPKELVRQACS
MNLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHSMNLEGAANIGILK
LWLSKLVPLVHDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDEQNSLRRALKQHT
PRIEVDLMNYLQNKKERRSKSSYDPSDVVGASPEEGYTSFSRKAHYLGRYSGGSLDSDGD
RKSSSQDSSLIKANLGQAASDESEEHTDSNSGIFGLKTKDLGYTVNSMSQNFGFQTSQVG
HVDSSMNFEGLSSDLDINGLMSSEHLNIAEDFGLDKEHPSELNHDHQSVEGVKENYKTDT
GPSIPQILHMICSEGAGSPILSKRTALQQLVEVSIANDHSVWTLYFNQILTVVLEVLDDS
DSSIRELALSLIVEMLKNQKDAMETSVEIVVEKLLNVTKDNVPKVSSEAEHCLTSVLSQN
DPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSA
DVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLKLVTIYANRISQARTGKTLDTAQV
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagcgcttgaactcgcacgcgccaaggacgcgaaggagaggatggccggcgtg
gagcgcctccacgaggttctcgaagcttctaggaggagcctcagttccgcggaagtcact
tcgctcatcgaatgctgcctggatctcttgaaggacagcagcttcaaggtctcgcagggc
gcacttcaggcgctcgactccgccgccgtccgcgctggcgaccacttcaagctccacttc
aatgcactcgttcccgccgtcgttgaacggttaggcgatgccaaacagcccgtccgcgac
gccgccagacgcctcttgctcactctcatggaggtttcatctcccacaataattgttgaa
agagcagggtcctttgcttggacgtgcaaaagcgggagaatcagagaggaatttgcacga
actgtcacttctgctattggtctattttcagcaaccgagcttcctcttcaacgtgctatt
cttcctcctattctgcagttgcttaatgatctaaatcctgctgttagggaagctgctact
ttgtgcattgaggagatgtattcacaagctgggtcccagtttcgtgatgaacttcagcgc
cacaatcttccttcatctctggtgaaagctattaatgccagactagagggaattcaacca
aaagttcaatcttcagatggtatttctagtggttatattgctggggaaatcaagcctgtg
ggtgttaatcccaaaaaaagtagtccaaaggctaaaagttcatcaagggagagctctctt
tttggaggagaaggtgatgttacagtgaaagtcatagaccccatcaaggtgtattcagag
aaggagttaatcagagaaatcgataagattgctgctacccttgtaccagaaaaggactgg
tcaattcgtattgctgccatgcaaagaattgaaggtcttgttttgggaggtgctactgat
tatccatgtttctttggactcctgaagcagcttgtagggcctttaagcacacaattgtca
gatcgaaggtctagcattgtgaagcaggcttgccatctattatgctttttgtcaaaggac
ctcttgggtgattttgaagcatgtgttgaattgttcatacccgtccttctgaagctagtt
gtgattactgtgctcgtaattgcagaatctgcagataactgcataaaaacgatgttacgc
aactgcaaagttgctcgtgtgcttcctcggatagctgattgtgcaaaaaatgatcgtagt
gctgtacttcgtgcaaggtgttgtgattatgctcttttgatactagaacattggcctgat
gcagtggaaatacaacgattggctgatttatatgaggatatgataaggtgttgtgtttca
gatgcaatgagtgaggtgcggtcaactgccaggatgtgttacagaatgtttgcaaagact
tggccagatcgttcccgtcatctgttttcgtcctttgaccctgctattcaaaggttaata
aatgaagaggatggaggaatgcataggagacatgcatcaccttctgtacgtgatagaggc
gcattgatatcaataactagtcaagcttcagctccctctaatctaactggttatggaact
tctgctattgttgcaatggatagaagttcaagtttatcatctgggacttccattacctct
ggctttctttcacaagccaagccacttggtaaaggtactgaacgcagtttggaaagtgtg
ctgcatgcaagcaaacagaaggtcactgctattgaaagcatgcttaggggattggatttg
tctgataagcatggttcatcagttctccggtcttcgagtttggatctaggagttgatcct
ccctcgtctcgtgatccaccattccctgctgctgtctcaacatctaatcatctgactagc
tctttaatgactgagtcaactgtttctggtgccaataaaggtagtaaccgcaatggtggt
ttgggtttgtctgatataattacccaaattcaagcttccaaagactctggtaggttagca
tatagtactaatgttggtattgagcctttatccgcatattcatcatactcaagtaagaga
gcttctgagaaattacaagaaagaagttctgttgatgaaaatagtgacatcagggacact
agacgatatatgaaccccaatgtagataggcagtatatggatacccattacagagatggc
aactttagggattcacagaatagttatgtgcctaatttccagaggccactattgagaaag
aatgtagctggacgtgtgtctgctggcagcaggaggagtttggatgatagccaattatct
gttggagagatgtcaatttatgcagatggaccagcatctcttcatgaagctctgagtgaa
ggacttagctcaggttctgactggtctgctagggttgctgcctttaattatcttcactct
ttgttgcagcaaggtcaaaagggaattcaagaaatagttcagaattttgagaaggtaatg
aagttgttttttcagcacttggatgatccccatcataaagttgcgcaggctgctctctcc
acacttgcagatattattctggcatgtagaaagccctttgagggttacatggaacggatg
ttacctcatgtgttttctcggttaattgatcccaaagagctagttaggcaagcctgctca
atgaatttggaagtggttagcaaaacatacagtatagattctctcttgcctgcattgcta
cgctcgctagatgaacaaaggtctccaaaggcaaaattggctgttattgagtttgcaata
agttcctttaacaagcattcaatgaatctggaaggcgctgctaatattggcattctaaaa
ttatggctttccaagttagttccattggttcatgataaaaatacaaaacttaaagaagcg
gctattacatgcatcatatctgtgtactctcactttgattcatctgcagttttgaatttt
attcttagtttgtcagttgacgaacaaaattctttgagacgagcccttaaacagcacacc
cctcgtattgaagtagacttaatgaattatctgcagaataagaaagagcgacgctccaag
tcttcctatgatccttctgatgtagtgggagcatcccctgaagagggatatactagtttt
tccaggaaagctcattaccttggaaggtattcaggtggctcactggatagtgatggtgac
aggaagtcaagttcccaagattcctctctgattaaagccaatcttggccaagcagcttct
gatgaatctgaggaacatactgattctaatagtggtatttttggtttaaaaactaaagat
cttggttacacagtcaattcaatgagtcaaaactttggctttcaaactagccaagttgga
catgtggacagtagcatgaattttgaaggtctatcatctgatctggatattaatggtctg
atgtcatcagaacatttaaatattgctgaagactttggacttgacaaagaacatccctct
gaattgaaccatgatcatcagtcagttgaaggtgtgaaagaaaactacaagactgacact
ggacccagtattcctcagattcttcatatgatatgcagtgagggtgctggaagccctatt
ttgagcaagcggactgcacttcaacagctagttgaagtgtctatagctaatgatcattcc
gtttggactttgtacttcaatcagattttgacagttgtgcttgaagtgctggatgattca
gattcctcaatcagagaacttgctctgtctctgatagttgaaatgcttaaaaaccagaaa
gatgccatggagacttctgttgagattgttgttgaaaaactgcttaatgttacaaaggat
aatgttcccaaggtctcaagcgaagcagagcactgcctcaccagtgttttatctcagaat
gatccgtttagatgtttaagtgttattgttcctctactggttactgaggatgagaaaact
cttgtcacttgcataaattgcttaacgaagcttgtggggcggctctctcaagaggaactg
atggctcagttaccctcttttctgcctgctttgtttgaagcttttggaaaccagagtgct
gatgttcgcaagaccgttgttttctgtctagtggatatttatatcatgcttgggaaagca
tttttgccatatttggaagggcttaacagcacacagttgaagttggtcaccatttatgca
aatcgaatctcacaggcaaggacaggaaaaacacttgataccgctcaagtctag
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integrated database retrieval system