Vigna angularis (adzuki bean): 108323404 Help Entry 108323404         CDS       T04660                                  Name (RefSeq) THO complex subunit 2   KO K12879   THO complex subunit 2 Organism var  Vigna angularis (adzuki bean) Pathway var03013   Nucleocytoplasmic transport var03040   Spliceosome Brite KEGG Orthology (KO) [BR:var00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     108323404   09122 Translation    03013 Nucleocytoplasmic transport     108323404  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:var03019]     108323404    03041 Spliceosome [BR:var03041]     108323404 Messenger RNA biogenesis [BR:var03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      108323404 Spliceosome [BR:var03041]  Complex C   Other components    EJC/TREX     108323404  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     108323404 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 ABPF_N SET7_N Motif Other DBs NCBI-GeneID:  108323404 NCBI-ProteinID:  XP_052727781 LinkDB All DBs Position 1:complement(64707086..64727578) Genome browser AA seq 1872 aa AA seqDB search MSLSSTESVYVTEECVREWRSGNPALKVSQAVPMLRFLYELCWTMVRGELPFPKCKVALD SVIFSEQASSDKIASNFADIVTQMAQDHTMPEDSRSRLIKLARWLVESEMVPIRLLQERC EEEFLGEAELIKIKAQDLKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAT TQKSSAATIGIIKSLIGHFDLDPNRVFDIVLECFELQPDDDVFIELIPIFPKSHASQILG FKFQYYQRMEVVSSVPFGLYRLTALLVKQDFIDLDSIYTHLLPRDVEAFEHYNTFSSKRL EEANKIGRINLAATGKDLMDDEKQGDVSIDLFAALDLETEATEERTTELQTSQTLGLLTG FLSVDDWYHAYLLFERLSPLNAVEHSQICDSLFRLIEKTICSAYDVVRQTHLQNPGSSSG GTDVMDVDNTSGYNSFIDLPKELFQMLSCTGPYLYRDTILLQKVCRVLRGYYLSALELVS RGNGALNPQLHFPGNPNLHLKEARLRVEDALGACVLPSLQLIPANPAVGQEIWELMSLLP YEVRYRLYGEWEKDDECIPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPM TVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSD WLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQYTENLT EEQLDAMAGSDTLRYQATSFGVTRNNKALIKSTSRLRDALLPKDEPKLAIPLLLLLAQHR SLAVVNADAPYIKMVSEQFDRCHGTLLQYVEFLGSAVTPSSSYGILIPSLHDLVHLYHLD PEVAFLIYRPIMRLFKSQRDPDIYWPLDDKRGASDASSNFESDPLDNSGSMVLNLGSAQN PISWSYLLDTVKTMLPPKAWNSLSPDLYATFWGLTLYDLYVPKNRYESEIGKLHANLKSL EELSDNSSSAITKRKKEKERIQESLDRLISELHKHEENVASVHRRLSHEKKIWLSSCPDT LKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMIC CCTEYEAGRLGRFLYETLKIAYYWKSDESIYERECGNMPGFAVYYRYPDSQRVTYGQFIK VHWKWSQRITRLLIQCLESSEYMEIRNALIMLTKISCVFPVTRKSGINLEKRVAKIKSDE REDLKVLATGVAAALAARKPSWVTDEEFGMGYLELKPAPTVTKSSAGNSATVHSGMNLNV SQNESASGKHVDSGNTAKDQVIRTKSADGKSERTESMTVTKSDSGHTKVKSGSMVNGLDA QTSSILPSMQSGVSKSMENSKQVEESINRSSDEHGTRNAESRASAKRSVPTGSLSKPSKQ EPVKEDSRSGKPVARTSGSLSSDKDLQTHALEGRHGGTTNVTSLVSANGNTITGSTKGSN PPIRISLDGPGNESKAEAGVAKSSDSRASVVKDEGNDTTDFTRGSSSRVVHSPRHENTGI TSKSNEKVQKRASSAEEPDRLGKRRKGDVEVRDFESEVRFSERDKLMDPRFSDEKLGPEE HGLYRAGDKSLERPKDKGNERYDRDHRERLDRMDKSRGDDSVAEKPRDRSLERYGRERSV ERMQERGSERSFNRLPEKAKDERSKDDRNKLRYSDASVEKSHADDRFHGQNLPPPPPLPP NMVPQSLGAGRRDEDADRRYGATRHSQRLSPRHEEKERRRSEETVVSQDDSKRRKEDDFR DRKREEIKVEEREREREKPNVLKEDLDLNAASKRRKLKREHLATGEPGEYSPVAPPPPPP GIGMSLGYDGRDRGDRKGPVIQHPNYIDEPNIRIHGKEVASKLNRRDSDPLYDREWDDEK RQRADQKRRHRK NT seq 5619 nt NT seq  +upstreamnt  +downstreamnt atgtctctttcatccacagagtctgtatacgtaacagaggagtgtgttcgcgaatggagg agtggcaaccctgccctcaaggtctcccaagctgtccccatgctgcgattcctctacgag ctctgttggactatggttaggggtgaactgccgtttcccaagtgtaaagttgctttggat tctgtcatattttcagaacaagcttccagtgacaaaatagcttcgaattttgctgatata gtgacccagatggctcaagatcatacaatgccagaagattcgcgttctcgtcttatcaag ctggcaagatggcttgtggaatctgaaatggttccaattaggctacttcaagaacgttgt gaggaagaattcttgggggaggctgaattgatcaaaattaaggctcaggacttgaagggt aaagaggtcagagttaatactcgacttctctatcagcaaaccaaattcaaccttctcaga gaagagagtgagggttatgcaaagctggtgactcttctttgccgggactctgaagcaact acacaaaaatcatctgcagcaaccattggcattattaagtcattaattggccattttgat ttggatccaaatcgcgtttttgatattgtcctagagtgttttgaactgcagcctgatgat gatgtgtttatagagttgattcccatatttccaaagtctcatgcgtcacagattcttggg ttcaaatttcaatattatcaacgcatggaagttgtcagctctgttccatttgggctctat agactcacagccttgctggtgaagcaggattttattgatcttgatagcatatacactcat ctacttcccagagatgttgaggcatttgagcattacaatactttctcttccaagcgactt gaagaggctaataaaattggaagaataaaccttgctgcgactggaaaagatctaatggat gatgagaaacagggggatgtcagtatagatctctttgctgccctagaccttgaaacagaa gcaactgaagagcggacaactgagcttcaaaccagtcagactttgggcttgctcactggc tttctttcggtggatgactggtatcatgcatatctattatttgagcgcctttcaccactc aatgctgtggaacatagtcaaatatgtgatagtttgttcagacttattgagaagaccatc tgttcagcatatgatgttgtccgtcagacacatcttcaaaatcctggatcatcgtcagga ggcactgatgttatggatgttgataacacttcaggatataattctttcatagatcttcct aaggaactttttcagatgctttcttgtactggaccttatctctaccgtgatactatactg ttgcagaaggtttgtagggtcttgagaggttattacctttcggctcttgagcttgtaagt cgtggcaatggtgccttgaatcctcaattgcattttcctggaaaccctaacttacatctt aaggaggcacggctaagggtggaggatgctttaggagcatgtgtacttccttctctgcag ttaattcccgccaatcctgctgttgggcaggagatatgggaactaatgagtcttcttcct tatgaggtgcgatatcgtttgtatggtgaatgggaaaaagatgatgagtgcattcctatg ctcttagctgcaagacaaactgccaagttggacactaggcgtattttgaaaaggctggca aaggaaaatttgaagcagctaggtcggatggttgcaaaattagctcatgccaacccaatg actgtcctccgaacaattgttcatcagattgaggcttacagagacatgattactcctgta gtggatgcatttaagtacctgactcagcttgagtatgatatattggaatatgttgtgatt gagcgcttagcacttggtggacgtgataagttaaaggacgatggccttaatttgtcagac tggcttcaatctctagcctcattttggggccatctgtgtaagaagtacccatcaatggaa ttacggggcctcttccagtatcttgtgaatcagttaaaaaaggggcaaggaattgagctt gttctactgcaggagcttattcaacaaatggcaaatgtccagtacacagagaacttgact gaggaacagcttgatgcaatggcagggagtgacactctcagatatcaagcaacttctttt ggtgtaactcggaataataaggcattgataaagtcaactagcagactgagagacgcatta cttccaaaagatgaaccaaagttggcaatcccactgttactacttcttgctcaacatcga tctctagctgtcgtaaatgcagatgcaccctacattaagatggttagcgagcagtttgat agatgtcatggaactctccttcaatatgtggaatttcttggcagtgcagtcaccccatca tcaagttatggcattcttattccctccctccatgacctagtccacctttaccacctggac cccgaggttgctttcttgatatatcgtcccataatgaggcttttcaagtctcagagagat cctgatatttattggcccttggatgataaacgtggtgctagtgatgcatcttctaacttt gagtctgatcctctggataattctggtagtatggtactaaatcttggctctgcccaaaat cctataagttggtcgtatcttcttgatactgttaaaaccatgttacctccaaaagcatgg aatagcttatctcccgatctttatgcaacattttggggtcttacgttatatgatctatat gtcccgaaaaatcgatacgagtcagaaataggcaagctgcatgcaaatcttaaatcattg gaggagctttctgacaattcgagctcagcaattacaaagaggaagaaagaaaaggaaaga attcaagaatctcttgatcggctgattagtgaacttcataaacacgaggagaatgttgca tctgttcatagacgtctttctcatgaaaagaaaatatggttaagttcctgtcctgacacc ttgaagatcaacatggagtttcttcagcgctgtatttttccacgctgtactttcagtatg ccagatgctgtttattgtgctatgtttgtccacacacttcattcccttggaacccctttt tttaacacagtcaatcatatagatgttttgatttgtaagaccctacaacctatgatatgc tgctgcactgaatacgaggcaggcaggcttggtaggtttctgtatgagactttgaagata gcttactattggaagagtgatgaatctatttatgaacgtgagtgtggaaacatgccaggg tttgctgtttactatagatatccagatagtcaacgagttacatatgggcagttcattaag gtacactggaagtggagtcaaagaatcacacgtttactaattcagtgtctggaatctagc gagtacatggaaattagaaatgcacttataatgttgacaaaaatttcttgtgttttccca gttacccggaagagtgggataaaccttgagaagcgagtagctaagattaaaagtgatgaa agagaggatcttaaggtgttggcaactggtgttgcagcagcattggctgctaggaagcct tcttgggtgactgatgaagaatttggtatgggttatcttgagttgaaacctgcaccaacc gtgactaaatcttcagctggaaattcagcaactgtgcatagtgggatgaatctcaatgtt tcacaaaatgaatctgccagtggaaaacatgtggactctggaaacacggccaaagatcag gtaataagaacaaaatctgcagatggaaagtctgaaagaactgaaagcatgactgtgaca aaatctgattctggccatacaaaagtcaagagtggttcaatggtaaatggattagatgcc caaacatcctcgatcttaccttctatgcaatctggggtgtcaaagtctatggaaaactca aagcaagtggaagaatcgataaatagatcatcagatgaacatggaacaagaaatgctgag tcaagagcttcagcaaagcgatcggtgcctactggttcactttcaaaaccatcaaaacaa gagcctgtaaaagaagatagtaggtctggaaaacctgttgctagaacttcaggctccttg agtagtgacaaggatctacaaacccatgcattggagggaagacacggtggaactaccaat gtaacttctttagtcagtgctaatggtaacaccattacaggttctactaaaggttcaaac ccaccaataaggatttcattggatggtcctggtaatgaatcaaaggctgaggctggagtt gccaagtcttctgatagtagagcatctgtggtgaaggatgaaggaaatgataccactgat ttcactagaggatcctcttctcgcgtagttcattcccccaggcatgaaaacacaggaatc acttcaaaatcaaatgaaaaagttcagaagagagccagttctgctgaagaaccagacaga ctaggtaaacgacgaaaaggagatgttgaggtaagagattttgaaagtgaagttcgattc tctgaaagagataagttgatggatcctcgcttttctgatgaaaaattgggaccagaggaa catggtctgtacagggcaggtgataagtcactggaacggccaaaagacaagggcaatgaa agatatgacagggaccacagggaaagattagaccgtatggacaagtctcggggtgatgac tctgtagcagaaaaacctagggataggtcccttgaaagatatggaagagaacgatctgtt gagagaatgcaagagaggggtagtgagaggagttttaatagactccctgagaaagctaag gatgaaagaagcaaggatgatagaaataagttacgttacagtgatgcatcagtagaaaaa tcacatgctgatgatcgcttccatggtcaaaacttgcctccaccaccccctttacctcct aatatggttcctcaatctttgggagctggtaggcgtgatgaagatgctgataggaggtat ggagctacgaggcactctcaaagactttctccaaggcatgaagaaaaggaacggagacga tcagaagagactgtggtttctcaggacgattcaaaacgccgtaaagaagatgattttcga gatcgaaaacgtgaagagattaaggttgaagagagggagagagaaagagagaaacctaat gtgctaaaggaagacttggatttaaatgccgcatccaagagacggaaacttaagagggag cacctagcaactggtgaacctggggagtactcacctgtggctcctccacctcctccccct ggtattggtatgtcactggggtatgatggaagggacaggggagacagaaagggacccgtc atccagcatccaaactacatagatgaaccaaatatcaggattcacggtaaagaggttgcc agcaagttgaatcgccgtgattcagaccccttgtatgatcgtgaatgggatgatgagaag agacaaagagctgatcaaaagcggaggcaccggaagtag

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