Vigna angularis (adzuki bean): 108323530
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Entry
108323530 CDS
T04660
Name
(RefSeq) DNA repair protein RAD4-like
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
108323530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108323530
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
108323530
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad4
Transglut_core
Motif
Other DBs
NCBI-GeneID:
108323530
NCBI-ProteinID:
XP_052726213
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Position
11:27142915..27148776
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AA seq
636 aa
AA seq
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MQRSGTGREAGGTKRDSERAPSSLGRREDDAVFGSFANVGAAATVNRNRLEELRTSDGLQ
LFPVNFAEDQTGARQNSEDGNKFQSPSDNGALTEISREAVGKLLRRANKVGTSRKKKTAE
FEPEQNGTQVLDPVLQPKTSEVGHCSRNPLGNASAGEKCSSSGQDHLDNKEELDDSDWED
GVIASDDHPVTIELNMTPHSTVQKQVRRASAEDKELAELVHKVHLLCLLARGRLIDNACD
DPLIQASLLSLLPAYLLQLSNVEKLTSKALYPLISWFHNNFHVKNCTSRETSPCFGLASA
LELHEGSPEEIAALSVALLRALNLTARFVSILDVSPLKPFQVASGSSCGIFKTSTPMISK
RKLDFKSPQESLSCREGENVCESSLAPSQKSKKCRVTKHMDQSRDLPIFEVRNDSVANLK
ASETQDSNLESCLTDKSRKSKRKGDLEFDMQLEMALSATAVESKESKNKSAANPESLCFS
CPSKRVKRVTGEESSTSSQVISTAIGSMKVGSPLYWAEVYCSEENLTGKWVHVDAVNLII
DGEDKVEAMVAACKTSLRYVVAFAGQGVKDVTHRFDIFSICVKYDKVKFFELLYYCLTCF
VICFWEFQIFLEIKNELFMFLGDQTEILSQYFLETN
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggtccggcacagggagggaagcaggtgggacgaagcgagactcagaacgcgca
cctagttcgctgggccggagggaagacgacgccgtcttcggttcgttcgccaacgtcgga
gctgcggcgaccgtgaatcggaaccggctggaggagttgaggacctccgacggccttcaa
ctatttcccgtcaattttgcagaagatcaaactggagcccgacaaaactcagaagatgga
aacaaatttcaatcacctagtgacaatggagcactgaccgaaatatctcgagaggctgtt
ggaaagcttctacgccgtgctaataaagttggcacttcccggaaaaaaaagacagctgag
tttgagcctgaacaaaatggaacccaagtcttggatccagtgcttcaaccaaaaacttca
gaggttggacattgtagtagaaatcccttgggaaatgcttctgctggagagaaatgtagt
agttcaggtcaggaccacttggataacaaggaagagctggatgactccgattgggaagat
ggtgtaattgccagtgatgatcatcctgtaacaattgaattgaatatgaccccacattca
actgtacagaaacaagtccgacgagcttctgccgaggataaggagttggctgaacttgta
cacaaggttcatttgctttgtttactcgcacgaggaagattaatagacaatgcttgtgat
gatcctcttattcaggcttctctgctttctctacttccagcatacttgctccagctatca
aatgttgaaaaactcacttcaaaagctctatatcctttaatatcatggttccacaataat
ttccatgttaaaaactgtacgagtcgagaaacttcaccatgctttggtttggcatcagct
ttagaattacatgagggcagtcctgaagagattgcagcattatcagtggctctattaaga
gctttaaatcttacagccaggtttgtgtccattttggatgtttctcctcttaaaccgttt
caagttgcaagtggatctagttgtgggatatttaaaacttctacaccaatgatatctaag
cgaaaattggattttaaatcacctcaagaatcattatcttgtcgtgagggagagaatgtt
tgtgaaagttctcttgccccttcgcagaaaagtaagaaatgtcgtgtgacaaagcacatg
gatcagtctagagatcttcctatttttgaagtaagaaatgatagtgttgcaaacttgaaa
gcttctgagacacaagatagtaacctggaatcgtgtctcactgacaaatctcgtaaatca
aagaggaaaggagatcttgaatttgatatgcagttggaaatggctctttctgctacagcc
gttgaatctaaggagagtaaaaacaagtcagctgcaaatcctgagtctttgtgtttttct
tgtccatccaaaagagtgaaaagggttaccggtgaagaatcttcaacctcctctcaagta
atttctacagcaattggatcaatgaaagtaggatctcctctgtattgggcagaagtatat
tgcagtgaagaaaatttgacaggaaagtgggtgcatgttgatgctgtgaatttgattatt
gatggagaggacaaggttgaggccatggtggctgcatgcaaaacatctttgagatatgtt
gttgcctttgctgggcaaggggtcaaagatgtgacccacaggtttgatattttctctata
tgtgttaagtatgataaagtgaagttttttgaacttttatattattgcctaacttgcttt
gttatttgtttttgggaatttcaaatattcttagaaattaagaatgaattatttatgttt
cttggagatcaaacagaaattctctctcaatacttcttggaaactaactga
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