Vigna angularis (adzuki bean): 108323623
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Entry
108323623 CDS
T04660
Name
(RefSeq) DNA mismatch repair protein MSH2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108323623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108323623
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108323623
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
108323623
NCBI-ProteinID:
XP_017411590
UniProt:
A0A0L9TR92
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Position
1:9440141..9448487
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AA seq
941 aa
AA seq
DB search
MAENFDDLTNKLPELKLDSKQAQGFLSFFKTLPDDPRAIRLFDRRDYYTAHGDNATFIAK
TYYHTTTAMRQLGNGSNALSSVSVSRNMFETIARDLLLDRTDHSLELYEGSGSNWRLVKS
GTPGNIGSFEDVLFANSEMQDSPVIVALSLNFRENGCTIGLGFVDLTKRVLGMAEFLDCH
FTNVEAALVALGCKECLLPIESVKSTEYRMLRDVLTKCGVMLTEKKKYEFRARDLVQDLC
RLVKGPIEPVRDFVSGFEYAPGALGALLSYAELLADESNYENYTLRRYNLDSYMRLDSAA
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHIWLKQPLVDVAEINSRLDIVQAF
VEDTVLRQDLRQHLKRISDIERLMHNLQKRRAGLQHIVKLYQSSIRLPFIKRALEIYDGQ
FSSVMRSRYLEPLQLWTDDEHLNKFIGLVEVSVDLDQLENREYMISPSYDSTLANLKEQR
ELLESQIHNLHRQTADDLDLPIDKALKLDKGTQFGHVFRITKKEEPKIRKKLNTQFIVLE
TRKDGVKFTNTKLKKLGDKYQQILEEYKNCQKKLVDKVVQTATTFSQVFESLAEIISELD
VLLSFADLASSCPTPYTRPDITPADEGDIILEGCRHPCVEAQDWVNFIPNDCKLVREKTW
FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATH
FHELTALALENVSNDPQKQIVGVANYHVSAHIDSSTRKLTMLYKVEPGACDQSFGIHVAE
FANFPESVVTLAREKAAELEDFSPPAASLTDTTQEVGSKRKRVFESDDMSRGSARARQFL
ETFVALPLVSMDKMQALQEVRKLTESLEKDAEHCNWLKQFL
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaatttcgacgacctaaccaataagcttcctgagctcaaattagattctaag
caagcgcaagggtttctatcatttttcaaaaccctacctgatgatccaagggctatacgg
ctttttgatcgtagggactattatactgcccatggcgacaatgcaactttcattgcaaag
acctactaccacactacgactgccatgcgacaactgggcaatggatcaaatgctctttcc
agtgttagtgtcagcagaaacatgtttgaaacaattgctcgtgatctccttttggataga
acagaccattctctcgagctctatgaaggtagtggttctaattggagactggtcaaaagt
ggaacgcctggtaatattggtagttttgaagatgttctgtttgctaacagtgaaatgcaa
gattctccagttattgttgctttgtcacttaacttccgtgaaaatggttgcaccattggg
ttaggatttgttgatctaactaagagagtgcttgggatggctgaattccttgactgtcac
ttcacaaatgtggaagcagcattggttgcacttggttgcaaagaatgtcttcttcccata
gagtctgtcaaatctactgaatacagaatgttgcgggatgtgttgactaaatgtggtgtg
atgttaaccgagaaaaagaaatatgaatttagagccagggatcttgtgcaggatctttgc
aggcttgttaaaggtcctatcgaaccagttcgagattttgtgtctggatttgaatatgca
cctggtgctctgggggcattactatcttatgcagagttactggcagatgaaagcaattat
gaaaactatacccttcgtaggtacaatcttgacagctatatgaggttagactctgcagcc
atgagagcacttaatgtcctggaaagcaaaactgatgcaaacaaaaatttcagtttgttt
ggtctcatgaataggacttgtactgctggaatgggaaaacggctattgcacatctggctt
aaacagccattagtagatgtggcagaaattaattctaggttggacatagtacaagcattt
gtagaggacactgtgcttcggcaagatctgaggcagcatctgaaaagaatatcagacatt
gaacgactgatgcacaatctgcagaagcgacgagctggtctgcaacatattgttaaactt
tatcagtcaagtattcgactacctttcattaaaagagctttagaaatatatgatgggcag
ttttcctcagtgatgaggagtaggtatttggaacctcttcagttatggactgatgatgag
cacttgaacaaattcattgggcttgtagaagtttctgttgaccttgatcaactggagaac
agggaatacatgatttctccaagctatgactctacactagctaacctaaaggaacaacga
gaattactagagagccaaatacataacttgcatagacaaactgctgatgatcttgatctg
cctatagataaggcattaaagttagacaaagggacacaatttggacatgttttcagaatc
acaaagaaggaagagccaaagataaggaagaagctcaatacccagtttattgtattggaa
acccggaaagatggagtgaaatttaccaacacgaagctcaaaaagctaggggataagtat
caacaaattcttgaggagtataaaaattgtcaaaagaagttagtggataaggtagttcaa
acagcgacaaccttttctcaggtgtttgaatctttggccgaaataatctctgaattggat
gtattactgagttttgctgatctagcttctagttgccctactccctacacaaggcctgat
atcactccagcggatgaaggagatattatcttagaaggctgcagacacccttgtgtggaa
gcccaagactgggtgaattttataccaaatgattgtaagcttgtcagagaaaaaacttgg
tttcaaataataacggggcctaacatgggtggtaaatcaacattcatccggcaggtgggt
gtgaatattttgatggcacaagttggttcatttgttccttgtgacaaagccagcatatct
gttcgtgattgtatttttgcccgtgtgggtgctggtgactgccaactacgtggtgtttct
accttcatgcaagagatgcttgaaactgcatcaatattaaaaggagcaactgaaaagtct
ttgataatcattgatgagttggggcgtgggacatcaacttatgatggatttggtctagct
tgggccatttgtgagcatattgttgaagttatcaaagctcctactttgtttgccacccac
tttcacgagctgactgctttagcccttgaaaatgtaagcaacgatccacagaagcaaatt
gttggcgtggcaaactatcatgttagtgcgcatattgactcatcaactcgaaagctaact
atgctatataaggttgaacctggagcttgtgatcagagttttggtattcatgttgccgag
tttgctaacttccctgaaagtgttgttaccctagctagagaaaaggcggcagaattagaa
gacttttctccccctgcagcatccctaactgatactacacaggaggtgggttctaaacgt
aagagagtttttgaatccgatgacatgtctcgagggagtgcaagggcacggcaatttctc
gaaacatttgttgctttgccactggtgtccatggacaaaatgcaagcgttgcaagaagta
aggaagttaacagaaagtttggagaaggatgctgaacactgtaattggctgaagcaattc
ttgtag
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