KEGG   Vigna angularis (adzuki bean): 108323786
Entry
108323786         CDS       T04660                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
  KO
K14962  COMPASS component SWD2
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108323786
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:var03019]
    108323786
   03036 Chromosome and associated proteins [BR:var03036]
    108323786
Messenger RNA biogenesis [BR:var03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     108323786
Chromosome and associated proteins [BR:var03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     108323786
    COMPASS/SET1 complex (yeast)
     108323786
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WD40 Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 NBCH_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_VPS8 KNTC1_N Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 108323786
NCBI-ProteinID: XP_017412022
UniProt: A0A0L9TMV2
LinkDB
Position
1:25846074..25853045
AA seq 334 aa
MGGTQTEREEKVSLELSEEILQSMEVGMAFKDYNGRISSLDFHRASSYLVTASDDESIRL
YEVTSGTCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH
HDRVVSLSLCSRKDCFISGSLDRTVLLWDQRAEKCQGLLRVKGRPAISYDDQGLVFAVAF
GGFVRMFDARKYEKGPFEIFSVGGDTSDANVVKFSNDGSLILLTTADGHIHVLDSFRGTL
LSTYNVTPVSCNSTLEASFSPEGMFVISGSGDGSIYAWSVRSGKEVASWRSATSDTGPPV
IKWAPGSLMFATGSSELSFWIPDLSKLGSYVGRK
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgggagggacacaaactgagagagaagagaaggtgtctttggagctcagcgaagaaatt
cttcagagtatggaagtaggaatggccttcaaagactataatggtagaattagttccttg
gactttcacagggcatccagttatctagtgactgctagtgatgatgaatccattcgactg
tatgaggttaccagtggaacttgtttgaagacaattaatagcaaaaagtatggggttgat
ctcgtttgcttcacatctcatcctacaacagtcatatactcttcaaaaaatggttgggat
gaatctttgcggcttctatcgttgcatgataacaagtatttgcgatatttcaaaggtcac
catgacagggtggtgtcgctaagcttgtgctctcggaaggactgctttatatctggttct
ctagatagaactgttttactatgggatcaaagggctgaaaaatgccagggactgttacgt
gtaaaaggaagacctgctatatcatatgacgatcaaggacttgtctttgcagttgccttt
ggaggatttgtaagaatgtttgatgctcgcaagtatgaaaagggtccctttgagatattt
tccgttgggggagatacttctgatgcaaatgttgtgaaatttagtaatgatgggagtctc
attcttttaacaacagcagatgggcatattcacgtgcttgactcatttcgcggcacactt
ttatccacatataatgtcacgcctgtctcatgcaactccacattagaagcttctttcagc
cccgagggaatgtttgtaatatctggttctggggatggaagcatctatgcatggagtgtt
cgaagtggcaaagaagttgcaagttggaggagtgcaacttctgataccggacctcctgta
ataaagtgggctcctggaagtctaatgtttgctactggatcatctgagttgtcattctgg
attccagatttgtctaagttgggatcctatgttggaagaaagtag

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