Entry |
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Name |
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
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KO |
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Organism |
var Vigna angularis (adzuki bean)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:var00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108323786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:var03019]
108323786
03036 Chromosome and associated proteins [BR:var03036]
108323786
Messenger RNA biogenesis [BR:var03019]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108323786
Chromosome and associated proteins [BR:var03036]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
108323786
COMPASS/SET1 complex (yeast)
108323786
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1:25846074..25853045
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AA seq |
334 aa
MGGTQTEREEKVSLELSEEILQSMEVGMAFKDYNGRISSLDFHRASSYLVTASDDESIRL
YEVTSGTCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH
HDRVVSLSLCSRKDCFISGSLDRTVLLWDQRAEKCQGLLRVKGRPAISYDDQGLVFAVAF
GGFVRMFDARKYEKGPFEIFSVGGDTSDANVVKFSNDGSLILLTTADGHIHVLDSFRGTL
LSTYNVTPVSCNSTLEASFSPEGMFVISGSGDGSIYAWSVRSGKEVASWRSATSDTGPPV
IKWAPGSLMFATGSSELSFWIPDLSKLGSYVGRK |
NT seq |
1005 nt +upstreamnt +downstreamnt
atgggagggacacaaactgagagagaagagaaggtgtctttggagctcagcgaagaaatt
cttcagagtatggaagtaggaatggccttcaaagactataatggtagaattagttccttg
gactttcacagggcatccagttatctagtgactgctagtgatgatgaatccattcgactg
tatgaggttaccagtggaacttgtttgaagacaattaatagcaaaaagtatggggttgat
ctcgtttgcttcacatctcatcctacaacagtcatatactcttcaaaaaatggttgggat
gaatctttgcggcttctatcgttgcatgataacaagtatttgcgatatttcaaaggtcac
catgacagggtggtgtcgctaagcttgtgctctcggaaggactgctttatatctggttct
ctagatagaactgttttactatgggatcaaagggctgaaaaatgccagggactgttacgt
gtaaaaggaagacctgctatatcatatgacgatcaaggacttgtctttgcagttgccttt
ggaggatttgtaagaatgtttgatgctcgcaagtatgaaaagggtccctttgagatattt
tccgttgggggagatacttctgatgcaaatgttgtgaaatttagtaatgatgggagtctc
attcttttaacaacagcagatgggcatattcacgtgcttgactcatttcgcggcacactt
ttatccacatataatgtcacgcctgtctcatgcaactccacattagaagcttctttcagc
cccgagggaatgtttgtaatatctggttctggggatggaagcatctatgcatggagtgtt
cgaagtggcaaagaagttgcaagttggaggagtgcaacttctgataccggacctcctgta
ataaagtgggctcctggaagtctaatgtttgctactggatcatctgagttgtcattctgg
attccagatttgtctaagttgggatcctatgttggaagaaagtag |