Vigna angularis (adzuki bean): 108324330
Help
Entry
108324330 CDS
T04660
Name
(RefSeq) polyadenylate-binding protein 7
KO
K13126
polyadenylate-binding protein
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03015
mRNA surveillance pathway
var03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108324330
09123 Folding, sorting and degradation
03018 RNA degradation
108324330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108324330
03041 Spliceosome [BR:
var03041
]
108324330
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108324330
mRNA cycle factors
Stress granule specific factors
108324330
Spliceosome [BR:
var03041
]
Complex C
Other components
Complex C specific factors
108324330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_5
RRM_occluded
RBD_DEAH11
RRM_7
RRM_3
Nup35_RRM_2
RRM_YTH1
Ty3_capsid
Motif
Other DBs
NCBI-GeneID:
108324330
NCBI-ProteinID:
XP_017412751
LinkDB
All DBs
Position
3:complement(31305998..31310662)
Genome browser
AA seq
498 aa
AA seq
DB search
MAVPATVAATQASLYVGDLHPEVTDTQLFQAFREFESLSSVRVCRDSMTRTSLRYGYVNF
MSQQDAIRAIKVKNNSYLFGKVMRVMWSHRDPNARKSGRGNVFVKNLADSIDNAVLHDLF
QKYGNVLSSKVVVYDDGKSKGYGFVQFESEESANSAIENLNGSTVRDKQIYVGKFVRKGD
RIVPGNDSKYTNLYIKNLDSDITEALLQEKFSTFGKIISLAIAKDDNGLSKGFAFVNYDR
PDDARKAMEAMNGSQFGSKNLYVSRAQKKAEREQILHNQFEEKRKEQILKSKGSNLYVKN
IDDAVSEKELRDLFSSCGRITSVKVMRSEKGISKGFGFVCFSNPEEANKAVSTFYGCMFH
GKPLYIAFAQRKEDRKTQLKLHYAPQQARLNGSSAAVIPGGFSSYFYPNVTSHMLQSGLL
YQPLGLGPGWRTNDFTLPTRSFQQSQVPIVPSTNRNHRLNRGRMNGHTNSVGKAHSGVYI
PQLQHYYQAMDSREYLTA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggccgttcccgcgacggttgccgccacccaggcttcactttacgttggagatcttcac
cctgaggtcaccgacacccaactattccaagccttccgggaattcgaaagcctctcttct
gttcgcgtctgcagggattccatgacgaggacgtcgctccgttacggttacgtcaacttt
atgtctcagcaagacgcaattcgagctatcaaggttaaaaataattcttatctctttgga
aaagtgatgagggtcatgtggtcacatcgcgatcctaatgcaaggaaaagtggcagaggg
aatgtgtttgttaagaacttggcagattcaatagataatgcggtgctacatgatttattt
caaaaatatgggaatgttttgtccagcaaagtagtcgtgtatgacgatgggaagagcaaa
gggtatggctttgttcaatttgagtcagaggaatctgcaaatagtgccattgagaacctg
aatggttctactgtgagagacaagcagatatatgttgggaagtttgtcagaaaaggtgac
cgcattgtgcctggtaatgattccaagtatacaaatttgtacattaaaaacttggattcg
gatattacggaagcacttcttcaggaaaagttctccacttttggaaaaattattagcttg
gctattgcaaaggatgacaatgggctatccaagggttttgcatttgttaactatgatagg
ccagatgatgctagaaaggcgatggaagcaatgaatggatcgcaatttggttcaaagaat
ctttatgtttctagggcacagaagaaggctgaacgtgagcaaatcttgcataatcaattt
gaggaaaaacgcaaggagcaaatactgaaatcaaagggctctaacctttatgtgaagaac
attgatgacgctgttagtgaaaaagaactacgagatctgtttagttcatgtggcagaata
acttctgtaaaagttatgcgaagtgaaaaagggataagcaaggggtttggttttgtctgc
ttctccaaccctgaggaggctaataaagccgtgagcactttttatggatgcatgttccat
ggtaagccactgtatattgctttcgctcagaggaaagaggataggaaaacacagttgaag
ctccactatgcaccacaacaagcacgattgaacggatcttctgctgcagttatccctggt
ggcttttcatcttacttctatccaaatgttacttcacatatgcttcaatctgggcttttg
tatcaacctctgggattgggaccaggatggaggactaatgactttacgcttcctactaga
tcatttcaacaatcacaggttcctattgttcctagcactaataggaatcataggctaaat
aggggaagaatgaatgggcatacaaattcagtgggaaaagctcactctggtgtatatatc
ccgcaactgcaacactattatcaggcgatggactcaagagagtacctgacagcttag
DBGET
integrated database retrieval system
