Vigna angularis (adzuki bean): 108324567
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Entry
108324567 CDS
T04660
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108324567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108324567
Enzymes [BR:
var01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108324567
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
HECT type E3
108324567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
108324567
NCBI-ProteinID:
XP_052730488
LinkDB
All DBs
Position
3:27746751..27754135
Genome browser
AA seq
1503 aa
AA seq
DB search
MESGDEEWELNEMERHENYFDEKFERAAQNLSKETEPSSQLALLIEICGVLPVCSKDIVS
HSLDLLSPLLVDHAKKKSNPDIMLFSLRAITFVCDLHPPGLEFFVEHDFVPTLCESLFAI
QYVDVAEQCVIVLEKISLRRPLVCLKAGVVMAVLNHIDFFSTDVKRVALSTMVNLCKKLP
SESPLPFLEAAPILCNLLGYEDHKLVENVATCLIKIVDSVYQSSELLDELCKHGLIQQVT
LLLSSSAQTTLSELTYYGLVGLLVKLSSRSFVAFRKLYELNISSTLIDILSTFELTNEVS
MSQQIGGNCNWVCSLGLILLYRSFYTSLLPSSYRSTSTSLLLPATVRYFPPSFWLPLGLC
FQPSFQLPFGSSLLPSGYRSVNEVLKLLNELVPDRTKDQNDQLVVDKESFLDNHSDLLQR
LGMDVFPMLIKMLNCGASLYVWHGCLSVMYKIVRLSKSGVHDELLKNVNISSFLAEVFTQ
KDQHMLMLALQIAEIILQKFPDDFLILFLKDGVYFAIDSLVRQEKRTTKLYPVNCGIQSD
FSQKSATRQALKCLCYAFSSGHSSTSSEVRKCKLAKNSVFDLAEHIKTTYFVRELYHSQT
DALQNLRTLSNDLLSMSTDNGVLSVHEEMTKSILYQIMDKLTGKEQVSISEFIESGVLKS
LADYLSQGRYMRNNMGIHDVFKDDAVIKKRFETLATVCLFASQPLSCEKTLSVFIRNLQT
ALTSLETFPVILSSGLQLRGSYVTVPKRRHLPYPSLNVCFIKVEGEDSLNEYSNGSARFI
CTVDPFSSQHSIEGFLRPKLGSKSTEHAGSSSIHALWQPETSPQSPLSSSTVPVEIPVSL
GHTDMMTDLPETQGYDEELQMNIGPNPEQKKCEPARCSSEATQKVVLYYEGQRMDHKSTL
YQEILRHALRQNDPFSSLKLWTKMHKITFRTAVENEDIIPPQCHSSPQDSSDDNVLAYCE
HTPFFSDLLSGELVTDLEKPSPTYDILFLLKSLEKINRIIFHLMSRERIYAFAKGNIGDL
DSLKITVPCIPQNEFVNTKLTEKLEQQMRDPLAVSIGAIPSWCNQLMASCPFLFGFEARC
KYFKLEVLSQSQAQPGWSYNGSGSMSGLRVSPGELPSKIFFIHRNQILESTAKMMKVHGN
NKSVLLVKYNGEVGSGLGPTLEFYTLVCHEFQKPGLGMWREEVNLQVEETRIRSFHGLFP
RPWLRDTSGGIHFSEVEKKFFLLGQVVGKALQDGRILDFHFSKAFYKLILGKELSLYDIQ
SFDPELYVVLQEFQALVMRKKYMESINERNSDIVSFRDQRIEDLCLDFTLPGYPDIVLAS
GTDRSMVNMRNLEDYVSLIVNATVRSGISRQVKAFQSGFNQILPIERIQIFNEEELERVF
CGESDSWAINDLEHQIIFHHGYTARSPPIVNFLEILREFDHEQKRAFLQFVTGAPRLPLG
GLASLSPMLTIVRKHSNHHPDTDLPSVMTCVNYLKLPPYSSKEIMKEKLLYVITEGQGSF
HLS
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaggtgatgaagagtgggaattgaatgaaatggagcgtcacgaaaactatttc
gatgagaaatttgaaagggctgcgcaaaacttgagtaaagagactgaaccctcttctcaa
ttagctttgctaattgaaatttgtggagttctgccagtttgctcaaaggatatagtctct
cacagcttagacttgttatctccactcctcgtagatcatgcaaagaaaaagagtaaccca
gatataatgttgttttccttaagggccattacctttgtatgtgatttgcatcctccagga
cttgaattttttgttgaacatgattttgttcctacattgtgtgaaagcttatttgctatt
cagtatgtagatgttgctgaacagtgtgtcatagtattggaaaaaatatctctaaggcga
ccacttgtttgcttaaaggctggagtagttatggctgttctcaaccacattgacttcttc
tcaacagacgtgaagagagtggctctttctactatggtgaacttatgcaagaagcttcct
tctgaaagtcctttacctttcctagaggctgcccctatattgtgcaatcttttagggtat
gaggatcataagcttgtcgagaatgttgctacctgcttgatcaaaattgtggatagtgtt
tatcagtcctcagaattgttggatgagctttgtaagcacggattgattcagcaggttaca
cttcttttaagttcaagtgctcagacaaccctatctgaattgacttactatggattggta
ggactacttgtcaaactttcatctcgatcatttgtagccttcaggaaattatatgaactc
aatataagcagcacattgatagatatattatctacgtttgagctcacaaatgaagtgtca
atgtcgcaacagattggtggaaactgtaattgggtatgcagcttaggtttgatattgcta
taccgttcgttttatacttccctactcccttctagctaccgctcgacatctacttccctc
ctccttccagctaccgttcggtacttccctccttccttctggctaccgcttggcctctgc
ttccaaccttccttccagctaccgttcggtagttccctccttccttccggctaccgttcg
gtaaatgaagtactcaaactgctaaatgagcttgtccctgaccggactaaagatcaaaat
gatcaactggtggtagataaagaatccttcctagataatcactcggatctcctgcaaagg
cttggaatggatgtgtttcccatgttaatcaagatgttaaattgtggtgcgagtttatat
gtttggcacggatgtttatctgttatgtacaagatagtacgtttgagcaaatccggggtg
catgacgaattgctcaaaaatgtcaatatttcaagttttttggctgaagtattcactcaa
aaggatcagcacatgttaatgttagcattacaaattgctgagataatccttcaaaaattt
ccagatgatttcttgatattgtttttaaaggatggtgtctattttgccattgattcacta
gtaagacaagaaaaaagaactacaaaattgtacccggtgaattgtggcattcagtcggac
tttagtcaaaaatctgccacaagacaggccctcaagtgcctatgttatgcattttcaagt
ggccattcttctacgtcatcagaagtcagaaaatgcaagcttgccaaaaactctgttttt
gatcttgcagagcacataaagacaacttacttcgttcgggaattatatcattctcagact
gatgctttacagaatctcagaacactatctaatgacttgttaagcatgtctacggacaat
ggtgttctttctgtgcatgaggagatgaccaagagtatattgtatcaaatcatggacaag
cttactggaaaggaacaagtttctatttctgaatttattgaaagcggagtcctgaaatca
cttgctgattatttatctcagggtcggtacatgaggaacaacatgggaatacatgatgtt
tttaaagatgatgccgtcataaagaaacggtttgagactttggctactgtctgcttgttt
gcttctcagcctctctcctgcgaaaaaactctttctgtcttcataaggaacttgcagact
gcactgacttcattggaaactttccctgttattctgagcagtggactacaactgagaggt
tcatatgtcactgttcctaagaggcgtcaccttccttaccctagtctgaacgtgtgtttt
atcaaggttgagggagaggattccctgaatgagtattcgaatggttctgctaggtttatt
tgtactgttgaccctttttcttctcagcattccattgaaggatttttacggccaaagctc
ggttcaaaaagcacagagcatgctggatcatcatccatccatgcactgtggcaacccgaa
acttctcctcaatcaccgttaagttcaagtacagtcccggttgaaattcccgtaagtttg
gggcacactgacatgatgacggatctccctgaaacacagggttatgatgaagaactgcag
atgaatataggaccaaacccagaacaaaaaaaatgtgaacctgcacgttgcagcagtgaa
gctactcaaaaggttgtcttgtactatgaaggacaacgtatggatcataaatccactcta
tatcaggaaattcttcggcatgcattaagacaaaatgatcctttttctagcttaaaactg
tggactaaaatgcataaaataacatttagaacggctgttgaaaatgaggacataatacct
ccgcaatgtcattcttcgcctcaggattcctctgatgataatgtattagcatattgtgaa
catactccttttttctcagatttgctctctggtgaacttgttactgatttggagaagcca
agcccaacttatgatattttatttcttcttaaaagcctggaaaaaataaaccgaattata
tttcaccttatgtctcgtgaaagaatttatgcttttgccaaagggaatattggagacctg
gatagcctaaaaataacagttccttgtattccacaaaatgagtttgtaaacactaagttg
actgagaagctagagcagcagatgagagaccctttggcggtctccattggtgctatacca
tcgtggtgcaatcaattaatggcttcatgtcctttcttatttggttttgaggcaagatgc
aagtacttcaaattggaagtacttagtcaatcacaagctcaacctggctggtcttacaac
ggatcaggatcaatgagtggtttgcgagtgagcccaggtgaattgcccagtaagatattt
tttattcatcggaaccagattttggaatctactgcaaaaatgatgaaggtgcatggtaat
aataaatcggttcttctggtgaaatataatggagaagtgggcagtggtcttggaccaact
ttggaattttataccttggtgtgtcatgagttccagaaacctggcttgggcatgtggaga
gaagaggtaaacttgcaggttgaggaaacgagaatccgttcttttcatggtctctttcca
cggccatggttgcgagatacatctggaggcatacacttctctgaagtagaaaagaaattt
ttccttctaggccaagttgttggtaaagcacttcaagatggaaggatcttagatttccac
ttctctaaagctttttataaacttattcttggaaaggaactctctctatacgacatacaa
tcatttgatcctgagctctatgtggtgctgcaagagtttcaggcgctagttatgaggaaa
aaatatatggaatctatcaatgaaaggaattctgacatagtaagctttcgagatcagaga
attgaagatctttgtctagatttcactcttcctggatatcctgatattgttctcgcttca
gggactgatcgttcaatggtaaatatgagaaacctagaggattatgtttcactaattgtc
aatgcaactgtgaggtctggaatttcaagacaagtgaaagcttttcaatctggatttaac
cagattttacccattgaacgtattcagatcttcaatgaagaagaacttgagcgcgtgttt
tgtggagagtctgactcttgggctatcaacgaccttgaacatcagattatatttcatcat
gggtacactgctagaagtcctcccattgttaattttttggagattctccgagagtttgat
catgaacagaaacgagcatttctgcagtttgtgactggagcacctcgacttccactagga
gggttggcatctctttctccgatgttaactattgtcagaaagcattctaaccaccatcca
gacacagacctaccaagtgtcatgacttgtgttaattatctcaagctacctccttattca
tcaaaagaaataatgaaagagaagttgttatatgtcataacagagggtcaaggatctttt
catctttcgtga
DBGET
integrated database retrieval system
