Vigna angularis (adzuki bean): 108324773
Help
Entry
108324773 CDS
T04660
Name
(RefSeq) polyadenylation and cleavage factor homolog 4
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108324773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108324773
03019 Messenger RNA biogenesis [BR:
var03019
]
108324773
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108324773
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
108324773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_PCFS4
Pcf11_C
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
108324773
NCBI-ProteinID:
XP_017413192
UniProt:
A0A0L9TZX2
LinkDB
All DBs
Position
3:complement(4537536..4539747)
Genome browser
AA seq
581 aa
AA seq
DB search
MSERQQIQYSECNQFSTSITYSPSNGYQPEILKALIDAYGKEESRECPSSKPLLVEQMHR
NCIDNKVWSKSWQNTEEEEFDWKDLKSTIVDNSRNKGSLPSTGFFSREIPVVAASATLSE
QNASKGWSTGSQLPLLHDSSAMAMKHSLVSSQSHDAMKIPHHRYNSSQHIFSRMGESRTL
TNTPINHIPKSYENPNGVRHAVPIMASGIPSNVKPPPSVVLAASETRPSVNQNVTRSPTM
KRAINNSMIVPAQSGGAFEKKDAYTTHMHQFPEKLPGQVSSNQKNHWKAPQPKFFPSQDP
STKQFGHGMDFLKRSGASTSTTMSNTLPTVLFPSPLPSIANYPFHPGHPPASSQMMIPHP
NVGPFMSSKQPPDTDQISHADISSDKLLPPQNSIGTEFKADILKVRHESVINGLYGDLPR
QCRSCGLRFRSQEEHRSHMDWHVTKNRKQRICREWFVRERMWLSGAEAVGTKSVAAFFPT
ERKEETKDEQELAVVAEEEQKRCALCEEAFEEFYSDEMEEWMYRGAAYLYQPTGKLATSI
ERSQLGPIIHAKCRSDPKMPLSQHLPEDDYQEGTPSKRMRI
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaggcaacaaatacagtattctgagtgtaatcaattttctacttctatcacc
tacagccctagtaatggatatcagcctgaaatattaaaagctttaattgatgcatatggc
aaagaagaaagccgagaatgtccaagcagtaaaccactattagttgaacagatgcatagg
aactgtatagacaataaagtgtggtcaaaatcatggcagaatacagaagaggaggagttt
gactggaaagatttgaagtcaaccatagtagacaatagcaggaataaaggttcattacct
tcaaccggctttttctccagggaaatacctgttgttgcagctagtgcaactttgtcagag
caaaatgccagcaagggttggtctactggatctcagcttcctctacttcatgattcctct
gctatggcgatgaagcatagcctggtctcctctcaatctcatgatgctatgaagattcct
catcatcgctataactcgtctcaacatatctttagtagaatgggtgaatcaaggactctt
acgaacactccaattaatcacattcccaaaagttatgaaaacccaaatggggttcgacat
gcagtgccgataatggcttctggcattccctctaatgtgaaacctccaccatcagttgtg
cttgcagcttctgaaacaaggccttctgtaaatcagaatgtcactcgatctcctactatg
aagcgtgcgataaataactctatgattgtaccagcacagtcaggtggcgcctttgagaag
aaggatgcatatactacacatatgcatcagtttcctgagaaacttcctggccaagtttct
tccaaccagaaaaatcactggaaagcaccacagcccaagttttttccatctcaggatcca
tcaaccaaacagtttggtcatgggatggattttttgaagagatctggtgcatccacaagt
acaaccatgtcgaatacgttacctactgtgctattcccttcaccacttccaagtattgca
aactacccttttcatccaggtcaccctcctgcttcatctcaaatgatgatacctcatccg
aatgttggtccgtttatgtcaagcaaacagccaccagatactgatcaaatttctcatgct
gacatctcatcggataaactactgccaccacagaattccatcggaaccgagtttaaagca
gacattctgaaggttcggcatgagtctgtaattaatggcttgtatggtgatctccctaga
caatgcagaagttgtgggctgagattcagaagccaagaggaacacagaagtcacatggat
tggcatgtgaccaagaatcggaagcagagaatctgtcgtgaatggtttgtgagggagagg
atgtggcttagtggtgcagaggcagtgggaacgaagtcagtagcagctttttttccgaca
gaaagaaaagaagaaacgaaagatgaacaagagttggcggtggtagcagaagaggagcag
aaaagatgtgcattgtgtgaagaggcttttgaggagttttacagtgatgaaatggaggag
tggatgtatagaggagctgcgtacctgtatcaacccacaggaaaattagcaacaagcata
gagaggtcacagttaggtcccataattcatgctaaatgcagatcagatcctaaaatgcct
ctctcccaacatcttccagaggatgattaccaagagggtaccccaagtaaacgaatgcgg
atttga
DBGET
integrated database retrieval system
