Vigna angularis (adzuki bean): 108324868
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Entry
108324868 CDS
T04660
Name
(RefSeq) ubiquitin receptor RAD23c-like
KO
K10839
UV excision repair protein RAD23
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03420
Nucleotide excision repair
var04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108324868
09124 Replication and repair
03420 Nucleotide excision repair
108324868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
var03051
]
108324868
03400 DNA repair and recombination proteins [BR:
var03400
]
108324868
Proteasome [BR:
var03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
108324868
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
108324868
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
Dsc3_N
CUE
Ubiquitin_2
UBA_RAD5A
TECR_N
Ubiquitin_4
Permuted_GreAB-C
Motif
Other DBs
NCBI-GeneID:
108324868
NCBI-ProteinID:
XP_017413290
UniProt:
A0A8T0KPX9
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Position
3:complement(2235227..2238844)
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AA seq
396 aa
AA seq
DB search
MKVFVKTLKGTHFEIEVQPQDTVSEVKQSIETVQGADVYPAAQQMLIHQGKVLKDATTLE
ENSVAENSFIVIMLSKSKSPSGEGSTTSTAPSTKTPQTSAPPTSTTPVSTAPQAPATVEA
PPATVTAPVSSAPAPASISSGTPVEGFDIYGQAASNLVAGSNLEGTIQQIIDMGGGSWDR
DTVVRALRAAYNNPERAVEYLYSGIPEQAEAPLVARASAGAQPANPPAAAAPQTAQPAPI
TSTGPNANPLDLFPQGLPNVGSGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQEL
GKQNPHLMRLIRDHQADFLRLINEPVEDGEGNILGQLAGGMPQAVTVTPEERQAIERLEA
MGFDRAIVLEVYFACNKNEELAANYLLDHMHEFDEQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttcgtgaagactctcaaaggcactcacttcgaaatcgaagtgcagccgcag
gacacggtttctgaagtgaagcaaagtattgaaactgttcagggtgcagatgtgtatcct
gctgcacagcaaatgctaattcaccaagggaaagttctgaaggatgctactaccttagag
gagaatagcgtagctgaaaatagtttcattgtaattatgctatcaaagagtaagagccca
tctggtgaaggttctactacttcaactgcaccatcgaccaagacaccacagactagtgca
cctcctacttcaacaacaccagtgtcaacagctccccaagctccagctacagtcgaggca
ccgccagcaactgttactgcacctgtatcttcggctccagctcctgcttctatttcttca
ggaactcctgtggaggggtttgatatctatgggcaggcggcatccaatcttgttgctgga
agcaatttggagggaacaattcagcaaattattgacatgggtggagggagctgggatagg
gatactgttgtccgtgctcttcgagctgcctataacaaccctgagagagctgttgaatat
ttgtattcaggtatccctgagcaagctgaagctcctcttgtagccagagcgtctgcaggt
gctcaacctgcaaatcctcctgccgctgctgctccacaaacagcacaacctgctccgatt
acctcaactggacctaatgctaatcccttagacctttttccccagggccttcccaatgtg
ggttctggtgcagctggtgccggctcgttggattttctacgcaacagtcaacaattccaa
gccttgcgggctatggtgcaggctaatccacaaatattgcagcctatgctacaggaactc
ggcaaacaaaatcctcatcttatgaggttgattcgagatcatcaagctgatttccttcgc
ctgataaatgaacctgtggaagatggcgaagggaatatattggggcagctggctggtggc
atgcctcaagcagtgactgtcactcctgaggagcgccaagctattgaacgtcttgaagca
atgggttttgatcgtgcgatcgtattggaggtgtacttcgcttgtaacaaaaatgaggaa
ttggctgccaactaccttttagatcacatgcacgagttcgatgaacaatag
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