Vigna angularis (adzuki bean): 108325206
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Entry
108325206 CDS
T04660
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var00040
Pentose and glucuronate interconversions
var01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
var00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108325206
Enzymes [BR:
var01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108325206
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
LHC
Motif
Other DBs
NCBI-GeneID:
108325206
NCBI-ProteinID:
XP_052729976
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Position
3:complement(26423509..26428578)
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AA seq
480 aa
AA seq
DB search
MFQATYILLFFSVLSSFLPHGTAAFNLTLPGQHPDPEAVATQVHRRVNASMGRREMLRLS
EKDVASCLTGNPIDDCWKCDPDWANNRQRLADCGIGFGQNAKGGKGGEFYIVTDSSDEDP
VNPKPGTLRYAVIRNEPLWIVFPSNMMIKLSQELIFNSYKTIDGRGADVHIVGGGCITLQ
YISNVIIHNIHIHHCHPSGNANVRSSPEHYGYRTESDGDGISIFSSRDIWIDHCTLSRCK
DGLIDAVMGSTAITISNNHFSHHNDVMLLGHSDHYLPDSAMQVTIAFNHFGENLVQRMPR
CRLGYIHVVNNDFTRWEMYAIGGSGRPTINSQGNRYTAPEDPYAKQITKRLDAGEGEWSG
WNWRSEGDVMLNGAFFVASGGEAGTDYQNAYSVEPKNVDRISLLTMSAGVLGVARDNNLG
MWTRGANDGGVYFSDTGPEYTDDMSQSTMPLPPSRIFPLLSAFLALLCLLFHTVTLTTLL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagcaacctacattttgctcttcttctccgttctgtcctcgtttttaccacat
ggaacagcagcattcaacctcactctcccagggcaacatccagacccggaagctgttgcc
acacaagttcataggagggtgaatgcttcaatgggaagaagggaaatgctgagattgtca
gagaaagatgtggcatcatgtcttacaggtaacccgattgatgattgttggaagtgtgac
ccagattgggccaacaacagacagagactggctgattgtggaattgggtttgggcagaac
gcaaagggtggaaaaggtggagaattttacatagtcacggattcatctgatgaggaccct
gtgaacccaaaaccaggaacacttagatatgcagtgatacggaatgaaccactgtggatc
gtgttccccagtaacatgatgattaagctctctcaggaactcattttcaatagttacaaa
accattgatggccgtggtgctgatgtgcacatcgtgggtggaggttgcatcactcttcag
tatattagcaatgtcattattcacaacattcacatccaccattgccatccttctggtaat
gctaacgtgcggtcgagtccagagcactacgggtaccgaactgaatcagacggcgatgga
atctcaatcttctcgtcgcgcgacatttggatcgatcactgcacgctatcccggtgcaag
gatggcctgatcgacgcggtgatgggttcgacggcaataacgatctcaaacaaccacttc
tcgcaccacaacgacgtgatgctcttaggccacagcgaccactacctgccagactcggcg
atgcaagtgacgatcgcgttcaaccactttggagagaatctggtgcagcgcatgccgcgt
tgcagactaggttacattcacgtggtgaacaacgacttcacgcgatgggagatgtacgcg
atcgggggaagtgggaggcctactattaacagccaggggaaccgctacactgcgccggag
gatccgtacgcaaagcagattacgaagaggctggacgccggagaaggggagtggagcggc
tggaattggaggtcggaaggggatgtgatgctgaacggcgcgtttttcgtggcctcagga
ggtgaggccggcactgactaccaaaatgcgtacagcgttgagcctaagaacgtggatcgt
atctcgcttctcaccatgtccgccggtgtgctcggcgttgccagggacaataatctggga
atgtggacgagaggagccaatgatggtggtgtatatttttcagatacaggcccagaatac
acggatgacatgtcccagagtacaatgccgctgccaccttcacgtattttccctcttctc
tctgcatttcttgctttattgtgcctcttatttcatacagttaccttaacaacacttcta
tag
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