Vigna angularis (adzuki bean): 108325804
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Entry
108325804 CDS
T04660
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108325804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108325804
Spliceosome [BR:
var03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108325804
Complex C
U4/U6.U5 tri-SnRNP related factors
108325804
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Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
108325804
NCBI-ProteinID:
XP_017414373
UniProt:
A0A0L9TZB1
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Position
3:15652937..15655968
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AA seq
388 aa
AA seq
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MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRILGAFYLRLTGSDIDVYRYL
EPLYNDYRKLRRKLTDGQFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESLNSLEPR
RSALEEDFEEEEEKEDNEQPVDEIEDRAYEKDYYRGRSPTRERDRDRRRDSHRYRDRDYD
RDYDRDYEREHDRERGRGRDRDRDRDRERDRDRYRLRDEKDYGREREGRERERRERDRDR
GRRRSHSRSRSRSRDRKEHDGGDYRKRHARSSVSPRRHGDGLEDGEPKKKKEKKEKKEKK
DDGTDHPDPEIAEANKLRAALGLKPLKV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgcacggatcctgcagcgaagagtataagagggacgaaccctcagaaccta
gtggagaagattctccggtcgaagatctatcagaacacgtactggaaggagcaatgtttc
gggttaacggcggagacgttggtggacaaggccatggagctggaccatctcggcggaact
tacgggggaaaccgtaaacctacgcctttcatgtgcctcgtcatgaagatgctccagatt
cagccagagaaagaaatcgtcatcgagttcatcaagaacgaggattacaaatacgttagg
atactcggcgcgttttacttgcgtctcactggctcagacattgacgtctaccgctacctc
gaacccttgtacaatgactatcgcaaactccggcgaaagttaactgatgggcagttttca
ttgacgcatgtggatgaggtcatcgatgaacttctcacaaaagattattcctgtgatatt
gctttgcctcgcgtcaagaaaagatggactcttgaatctttgaattcattggaacctaga
cgaagcgcacttgaagaagattttgaggaggaagaagagaaagaggataatgagcaacct
gttgacgagattgaagatagagcctatgagaaggattattatcgtgggcgaagcccaaca
agggaaagagacagggacagaaggcgtgatagtcatagatacagggaccgtgactatgac
agagactatgatagagattatgaacgagagcatgatcgggagcggggacgcggcagagat
agagacagggacagagacagggagagagacagggatcgatatcgtctgagggatgaaaaa
gattatggtcgtgagagagaaggtagggagcgggagaggagagagagggatcgtgaccgt
ggaaggcgaaggagccactcaaggagtcgaagtaggagtagggatcgcaaggaacatgat
ggtggtgactacagaaagagacatgctagaagtagtgtaagccctagaagacacggagat
ggacttgaggatggtgagccaaaaaagaagaaggagaaaaaagaaaagaaagaaaagaag
gatgatggcactgatcacccagatcctgagattgcagaagcgaacaagctccgagcagcc
ctgggtttgaaaccgctgaaggtctga
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