Vigna angularis (adzuki bean): 108325842
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Entry
108325842 CDS
T04660
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108325842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108325842
03041 Spliceosome [BR:
var03041
]
108325842
03036 Chromosome and associated proteins [BR:
var03036
]
108325842
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
108325842
Spliceosome [BR:
var03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
108325842
Complex B
108325842
Complex C
U2 SnRNP specific factors
108325842
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
108325842
TFTC complex
108325842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
108325842
NCBI-ProteinID:
XP_017414415
UniProt:
A0A0L9U179
LinkDB
All DBs
Position
3:complement(749549..755187)
Genome browser
AA seq
1214 aa
AA seq
DB search
MYLYSLTLQRPTGIICAINGNFSGGKSQEIVVARGKVLDLLRPDDNGRIQTILSVEIFGA
IRSLAQFRLMGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYL
AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVYSICGVDCGFENPI
FAAIELDYSEADQDSTGQAAEEAQKHLTFYELDLGLNHVSRKWSEQVDNGANLLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRNDLPAERGVLIVSAAMHKLKSMFFFLLQ
TEYGDIFKVTLEHNNDRVSELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHALYQFKSI
GDEDDVEASSATLMETEEGFQPVFFRPRRLKNLVRIDQVESLMPIMDMKVSNLFEEETPQ
IFTLCGRGPRSSLRILRTGLAVSEMAVSKLPGIPSAVWTVKKNVIDEFDAYIVVSFTNAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TISKVGSNRLQVVIALSGGELIYFEVDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDKTIRILSLDPDDCMQALSVQSVSSAPESLLFLEVQASVGGEDGADHPASLFL
NAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFLIIVRGKRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCVEGVVAVAGEALRIFTIERLGETFNETVIPLRYTP
RKFVLQPKRKLLVMIESDQGALTAEEREAARKQCFEAAQAGENGTGSADQMENGGDDEDK
DDPLSDEHYGYPKTESEKWVSCIRVLDPRTGNTTCLLELQENEAAFSICTVNFHDKEYGT
LLAVGTAKGLQFLPKRTVTAGFIHIYRFVEDGRSLELLHKTQVEGVPLALCQFQGRLLAG
IGPVLRLYDLGKRRLLRKCENKLFPNTIVSIQAYRDRIYVGDVQESFHYCKYRRDENQLY
IFSDDCVPRWLTASYHIDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKL
NGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECIVFGTVMGSVGALHAFTSRDDVDFFS
HLEMHMRQDHPPLCGRDHMAYRSSYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPG
EILKKLEEVRNKII
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacagtctcactctccagcgtcccaccggcatcatctgtgccatcaacggc
aacttctccggcggcaagagccaggaaatcgtcgtcgcccgaggcaaggtccttgatctc
ctccgtcccgacgacaatggccggatccaaaccatcctctccgtcgaaatcttcggcgcc
attcgctctctcgctcagttccgcctcatgggcgctcagaaggactacatcgtcgttggc
tccgactccggccgcatcgtaatcctcgaatataacaaagagaaaaacgtattcgacaaa
gttcaccaagaaaccttcggaaaatctggttgccgccgaattgtcccaggtcagtacctc
gccatcgatccaaagggtagggccgttatgattggcgcctgcgagaagcagaaactcgtt
tatgttttgaatagggacactgctgctaggttaaccatttcttcccctttagaagctcat
aaatcgcacactttagtttattcaatttgcggtgttgactgtggctttgagaaccctatt
tttgctgctattgaattggactactctgaggccgaccaggattccactggtcaggctgct
gaagaggctcagaagcatttgaccttttatgagcttgatcttgggctcaaccatgtttcg
cggaagtggtccgagcaggttgataatggggccaatttgcttgttactgttcctgggggt
ggtgatggtcctagcggggtgcttgtttgtgctgaaaattttgtcatttataagaatcag
ggtcatcctgatgttagggctgtgattccgcggcgaaacgacttgccggctgagcgtggc
gtgcttattgtctcggctgccatgcataaactgaagagcatgttcttcttcctcctgcag
acggagtatggggatatttttaaggtcacattggaacacaacaacgaccgtgtatctgaa
ttgaagattaaatattttgatactattcctgttactgcttcgatgtgtgtgctgaagtca
gggttcttatttgctgcctcagagtttgggaaccatgctttgtatcaatttaagtctata
ggggatgaggatgatgtggaggcatcatctgccacgctaatggaaaccgaggaaggtttt
cagcctgtgtttttccggcccaggaggctgaaaaaccttgtcaggattgaccaggttgag
agtttaatgccaataatggatatgaaggtcagtaatctctttgaagaggaaactcctcag
atttttactctctgtggacgtggtcctaggtcgtctttgaggattttgagaactggttta
gcggttagtgagatggctgtgtccaagcttcctggtataccaagtgctgtttggacggtg
aagaagaatgttattgacgagtttgatgcttacattgttgtgtcattcacaaacgcaact
cttgtgctttccattggtgagactgttgaagaagttagtgacagtgggtttcttgacacg
actccctcccttgctgtttctttgataggagatgattctctcatgcaggttcacccaaat
ggtattaggcatatcagggaggatggccgtattaatgaatggagaacacctggaaagagg
acaatttcgaaagttggatcaaacaggcttcaggttgttattgcactcagtggaggggag
cttatatattttgaagtagatgtaactggtcagttgatggaggtggagaagcatgaaatg
tctggagatgttgcttgtttagacattgctccagttcccgaaggcagacaaagatctcga
tttcttgcagttggctcatatgacaagaccatccgcatcttatcactggatcctgatgat
tgtatgcaggcactaagcgttcagagtgtttcttcagctccagaatctctactttttctt
gaagttcaagcttctgttggtggtgaggatggtgcagatcatcctgctagcctattcttg
aatgctgggttacagaatggtgtgttgtttagaactgtggtggatatggttacaggtcag
ctttctgattcgcgttccaggttcttaggattgagagccccaaagctgtttctcatcatt
gtgaggggcaagcgggctatgctttgtttgtctagtcgaccctggcttggttatattcac
caaggacatttccttttaacacccctttcatatgaaacccttgaatatgctgcttcattt
tcatctgaccagtgtgtagaaggtgtagttgctgttgctggcgaggccttgagaattttt
accatagaaaggttaggagaaacatttaatgaaactgtaattccattaaggtacacacca
aggaaatttgtgctgcaacccaaacgaaaactccttgtgatgattgagagtgatcaggga
gcattaactgcagaagagcgtgaagctgctaggaaacagtgttttgaggctgctcaagcc
ggggagaatggtactggaagtgcagaccaaatggagaatggtggtgatgatgaagataaa
gatgatcccctctctgacgaacactatggctatccaaaaactgaatcagagaaatgggtt
tcatgcatcagagttcttgatcccaggacaggaaatacaacatgtcttttggagcttcag
gagaatgaggctgctttcagcatatgcacagtaaatttccatgataaggaatatggaacc
cttttagctgttgggacggcaaagggacttcaatttttgcccaaaaggactgtaactgca
ggatttattcatatttataggtttgtagaggatggaagatctcttgaacttcttcacaaa
acacaggtagaaggtgttcctcttgctctatgtcagtttcaaggaagattacttgcaggg
ataggacctgtgctcaggttatatgatttgggaaaaagacgtctgttaagaaaatgtgag
aataagctattccccaacacgattgtctctattcaggcatatcgtgatcgaatttatgtt
ggtgatgttcaagagtctttccattactgcaagtataggcgggacgaaaaccaactttat
atattttccgatgattgtgttccaaggtggcttactgcatcgtaccacatagattttgac
accatggcaggcgcagacaagtttggaaatatctattttgtgcggctgccacaggatgtt
tcagatgagatagaagaagatcctactggtggtaggatcaagtgggagcaaggaaagctg
aatggagctcccaataaggtggaagaaattgtacagtttcatgttggtgatgtggtcaca
tgcttgcaaaaggcttctctcataccaggtggtggagagtgcattgtatttggaacagtt
atgggaagtgttggtgctctacatgcctttacttcacgagatgatgttgacttcttttct
catttggagatgcatatgagacaggatcacccacctttgtgcggaagagaccacatggca
tatagatcttcatattttcccgttaaggatgttattgatggggatctatgcgagcaattc
ccaacattgccaatggatttgcagagaaaaattgctgatgaattggacagaacccctgga
gagatactgaagaaactcgaggaagtgagaaataagattatttaa
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integrated database retrieval system
