Vigna angularis (adzuki bean): 108325880
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Entry
108325880 CDS
T04660
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
var03009
]
108325880
03036 Chromosome and associated proteins [BR:
var03036
]
108325880
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108325880
Ribosome biogenesis [BR:
var03009
]
Eukaryotic type
Pre-60S particles
Helicases
108325880
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
108325880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
zf-CCHC
ResIII
CMS1
YgbB
ERCC3_RAD25_C
Cas3-like_C_2
zf-CCHC_2
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
108325880
NCBI-ProteinID:
XP_017414484
LinkDB
All DBs
Position
3:16556013..16564669
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AA seq
734 aa
AA seq
DB search
MVSSSTIPLSSSISIFKNPSLHLLRRPTTSVSFNTLPRNSTLSSVTSAITTPTSSVLTQQ
SFEGLTLDDVSNGLQFGYDHQPDHVSDHELDISKLSLPSSLFHALQKRGITSLFPIQRAV
LVPALEGRDIIARAKTGTGKTLAFGIPILRGLTHDDDDEQSSHRRHSRLPKALVLAPTRE
LAKQVEKEIQESAPYVKTVCVYGGVSYVTQQSALSRGVDVVVGTPGRIIDLLNGGSLTLS
EVQYLVLDEADQMLAVGFEEDVEVILDKVPAQRQTMLFSATMPGWVKKLSRKHLNNPLTI
DLVGEQEEKLAEGIKLYALSATATSKRTVLSDLITVYAKGGKTIVFTQTKKDADEVSLAL
TSSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDA
ETFVHRSGRTGRAGKEGTAILMYTSSQKRTVRSLEHDVGCKFEFISPPAMEEILESSAEQ
VVATLNRVHPESVKFFTATAQKLVEEQGASALAAALAQMSGFSQPPSCRSLINHEQGWIT
LQLTRDSDTSGRFFSARSVTGFLSDVYSPAADEVGKIHLIADERIKGAVFDLPEEVAREL
LKKELPSGNTISKITKLPPLQDDEPASDFYGKFSDRDRSNRRGSNSRDQRGFRSSRGWEG
GQDSDDEFGTGSRNFRSGNNRSRMGKNSGDDWLIGGGRSNRFSSSNRSGHGGACFNCGQP
GHRAADCRKKRDFF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggtttcttcttctaccatacctctctcttcttccatttccatattcaaaaacccctct
ctccatctcctcagaagaccaaccacctccgtttcattcaacacccttccccgtaactcc
acgctctcttccgttacttcggccattaccacccccacttcttccgttctcacccaacaa
tctttcgagggtttaactctggacgacgttagcaatggcctccaatttggctatgaccac
caacccgaccacgtcagcgaccacgaacttgacatttccaagttgtctttaccttcctcc
ctctttcacgccctacaaaaacgtggaatcacaagcctctttcccattcagagagctgtg
ttagtgcctgcattagaaggtagagatatcattgctcgagcaaagaccggcactggcaaa
acattagcattcggaattccaattctcagaggcctcactcatgatgatgatgatgagcaa
agttctcacaggaggcatagcaggcttcccaaggcattagtcctagcacctactagggag
ttagccaagcaagttgagaaggagatacaggaatctgctccttacgtgaaaacggtttgt
gtttatgggggtgtttcttatgtaacgcagcagagtgcgctttcgcgaggtgttgatgtg
gtggttggaacaccgggtagaataattgatctattgaatggaggtagccttactctgagt
gaggtgcagtatttggtgcttgatgaagctgatcagatgcttgctgttgggtttgaggag
gacgtggaggtcattttggataaggtccctgcgcagcgccagaccatgttgttttctgct
accatgcctggttgggtcaagaaactgtccagaaagcatttgaacaatcctttgacaatt
gatttggttggcgaacaagaagagaaacttgctgaagggatcaaactttatgctttatca
gccactgccacttcaaaacggacagttctgtctgatcttataactgtttatgcaaagggt
ggaaagactattgtttttacgcagacaaaaaaggatgctgatgaagtatcattggcatta
acgagtagtatagcctctgaagcactgcatggtgatatatctcagcatcagagagagaga
acattgaatggttttcgacaagggaaattcacagtgcttgttgccactgatgttgctgct
cgtggacttgatattccgaatgttgatttggttatacattatgaacttcccaatgatgct
gagacttttgtacatcgttctggtcgcactgggcgggcaggaaaagagggtactgccata
ttgatgtacaccagtagccagaagagaacagttagatcccttgagcatgatgttggctgc
aaatttgaattcattagtccaccggctatggaagaaattttggagtcatctgctgaacaa
gttgttgctacacttaatagagttcatccagagtctgtgaagtttttcactgcaactgcg
caaaaactggttgaagaacaaggagcaagtgcccttgcagctgctctagcacagatgagt
ggattctctcaacctccatcatgtcggtctcttatcaatcatgaacagggatggattaca
cttcaacttacacgagattcagacacttctggaagatttttttctgcaagatctgtcact
gggtttctttctgatgtttattctccagctgctgatgaagttggaaaaatacatttaatt
gcagatgagaggattaaaggagctgtctttgatctcccggaggaagttgctagagagttg
ctcaaaaaggaactgccttctggaaacactatttccaaaatcaccaaattacctcctttg
caagacgatgaacctgcaagtgatttctatgggaagttttctgacagagacagaagtaac
cgaaggggttctaattctagggatcaaagaggctttagaagttcacgaggatgggaagga
ggccaagactctgatgatgagttcggaacaggcagtagaaatttcagatcaggcaacaat
aggtctcgaatgggaaaaaacagcggcgatgactggctaattggaggtggacgatccaac
agattttcatcatccaacagaagcgggcacggaggggcctgtttcaattgtggacaacct
ggccatcgagctgcagattgtcgcaaaaaacgagactttttctag
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