Vigna angularis (adzuki bean): 108325952
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Entry
108325952 CDS
T04660
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II isoform X1
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108325952
Spliceosome [BR:
var03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
108325952
BRITE hierarchy
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GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Lactamase_B_3
Anti-Pycsar_Apyc1
EFR3
Motif
Other DBs
NCBI-GeneID:
108325952
NCBI-ProteinID:
XP_052730175
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Position
3:complement(42371824..42392553)
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AA seq
537 aa
AA seq
DB search
MAIETLVLGAGQEVGKSCVVVTMNGKRIMFDCGMHMGFLDHRRYPDFTLVDPNQDFNSAI
TCIIITHFHLDHVGALAYFTEVCGYNGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEELF
SSDQIAECMKKVTAVDLRQTVQVDEDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNM
TPDRHLGAAQIDRLRLDLLITESTYATTIRDSRYAREREFLKAVHKCVSCGGKVLIPTFA
LGRAQELCILLEDYWERMNLQVPIYFSAGLTIQANAYYKMLISWTSQKIKDTYSKHNAFD
FKNVQKFERSMINAPGPCVLFATPGMISGGFSLEVFKQWAVSENNLVTLPGYCVAGTIGH
KLMSDKRAKVDLDAKTRIDVRCQVHQLAFSPHTDSKGIMDLVNFLTPKHVILVHGEKHKM
ASLKEKIHSEFGIQCYDPANNETICISSTHSVNAEASDTFIRSCLSPNFTFQKCSSADAC
NSTTIGKSLMPMVQVEDERVSEGVFVVERGKKPKIVHKDELLLMLEEQKHDTMSGTF
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgaaacgctagtgttaggcgctggtcaagaagttgggaagagctgcgtggtg
gtaaccatgaatggcaaacgaatcatgtttgattgtggaatgcatatggggttcttggac
catcgtcgttaccctgatttcacccttgtcgatcccaatcaagatttcaactctgccatt
acttgcatcatcatcacccactttcatttggatcatgttggcgctttagcttacttcaca
gaagtttgtgggtataatggaccaatttacatgacgtacccaacaaaagctttggctcct
ttgatgttggaagactatcgcaaagtgatggttgatcggcggggtgaggaagagctattc
tcatctgatcaaattgctgagtgcatgaagaaggttactgctgttgatttgaggcaaact
gtacaagtagatgaagacttgcagatacgtgcctattacgcaggacatgttattggagct
gcaatgttctatgcaaaagtaggagatgcagaaatggtttatactggagactacaatatg
acaccggatagacaccttggagcagctcaaattgatagattacgacttgaccttcttata
actgaatccacatatgcgactacaattcgtgattcaagatatgctcgagagagggaattc
ctcaaagctgttcataaatgtgtatcatgtggaggcaaggtgcttattccaacatttgct
cttggaagagctcaggaactatgcattttgttggaggactactgggaacgcatgaatttg
caggttcctatctacttctcagcaggattaacaatccaagctaatgcgtattataaaatg
cttattagttggacaagccagaagattaaagatacatactctaaacataatgcttttgat
tttaagaatgttcaaaaatttgaaaggtctatgataaatgctcctggtccttgtgttctt
ttcgcgactcctgggatgataagcggtggattttcacttgaagtttttaagcagtgggca
gtgtcagaaaataaccttgtcactttgccagggtattgtgtggctggaacgataggtcat
aaattaatgtcagataagcgggccaaagttgatctggatgctaagacaagaatagatgtg
cgatgccaggttcatcaattagcttttagtcctcacactgattctaaagggataatggat
cttgtaaattttctcacccccaagcacgttattctagtgcatggagagaagcataagatg
gcttcccttaaagaaaagattcattctgaatttgggattcaatgttatgatcctgcaaac
aatgaaaccatatgcatttcttcaactcactctgtaaatgcagaagcctcagacactttc
attcgaagctgcttgagtccaaacttcacatttcagaaatgtagttctgcggacgcatgt
aactctactacgataggcaagagcttaatgcctatggtccaagttgaagatgaaagggta
tcagagggagtttttgttgtggagaggggtaaaaagccaaagattgtacacaaggacgaa
cttttgcttatgttggaagaacagaagcacgatacaatgagcgggacgttctga
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