KEGG   Vigna angularis (adzuki bean): 108325970
Entry
108325970         CDS       T04660                                 
Name
(RefSeq) splicing factor U2af large subunit B
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108325970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:var03041]
    108325970
Spliceosome [BR:var03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108325970
 Complex B
    108325970
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 108325970
NCBI-ProteinID: XP_017414636
UniProt: A0A0L9TTI5
LinkDB
Position
3:41984350..41997301
AA seq 974 aa
MSKSNRAKDKHGKSDKLSGDNCDEGSAARTRPFSFEEIMLRRRNKELLENVKDPALGCSL
EKIDDHFESARIHKHDKSSSFGREKHASEEYVKVSSRKKVQNTYVKEDDLIEVKGRANHN
LETKSSAGLNNKGKMTKEKTEKEMFGHRKNEKIHESSEYKAGNKHSRDRESYVEENRPKS
ERKVKKKNHVGEDENPNEYVIEKRHDNDRDNSWRLKRWLGNNSEEVPEKKHYRESDKDKH
AGGREKYARETKRKYQNGDDETQDRSTSRKHDAVKHHKMHSYERKERRAKVKSHYEELIA
KRRRSRSREREDSSPSFPPRQQKRTYQDGERKESSMHSLKDSSRKKHPDTDKSKVSTNGS
SSHHHRHGGSTSGLGGYSPRKRKSEAAVKTPSPSKHSLEKKRAGWDLPPVGANNPSPTVV
SSSFLLSNGAVLSNMHGVVSTNSLDLALVKRRPISFPNDVITGKNSNIDSVQLTQATRPI
RRLYLENLPASASEKAVMDCFNNLLLSGRVNPIQQAQPCISCVLHKDRGQALVEFLTAED
ASSALSFDGNTLFGSIVKIRRPKDYVEVATGEPERSMDATVTISDVVIDSPHKIFIGGIS
NLLSSEMLMEIASAFGSLKAYHFETNASNASCAFLEYSDHSVSIKACAGMNGMKLGGEVL
TVVQAMPDASSPLENAGEPSYGIPEHAKPLLRKPTPVLEIKNVFAAESISSLSDMTIEEI
LDDVRFECARFGTIKSINVVRHSSEKDLAIKLEECEVINEVESKDFQDTNSVSTKSSFSD
RATDPKSEATNWVKFDDAKELEEYKVDDGTGVNTDKNAEVFDDESCQEHLVNDTAVENVG
GKSIPSSIIQEYPDQQDTSDDVPKLDDEMVANDTGVDIENKIVGENTDSKGTVSAVQEGF
SERVTRFELVGPQKVTDTEDDNDHVFEPGSVLVEYRRAEACCSAAHSLHGRLFDGRMVTV
EYVAERLYRARFTK
NT seq 2925 nt   +upstreamnt  +downstreamnt
atgagcaaatctaatcgtgcaaaggataagcatggaaaaagtgataagctttctggggat
aattgtgatgaagggagtgcagcccgtacaaggccatttagttttgaagagattatgctt
agaagaagaaacaaagaactgcttgaaaatgttaaagaccccgcacttggatgttctcta
gagaaaattgatgatcattttgagtctgccaggatccataaacatgacaaaagctcatcc
tttggcagggagaaacatgcttctgaggaatatgtgaaagtaagttctagaaagaaggtt
caaaatacatatgtaaaggaagatgatttaattgaagtgaaaggtagggctaaccataat
ttggaaactaaatcaagtgctggattaaataataaaggcaagatgaccaaagaaaagact
gagaaagagatgtttggtcatagaaaaaatgagaaaattcatgaaagttctgagtataaa
gctggaaataagcattcaagagatagggagagttatgtggaagaaaatagaccaaaatct
gaaaggaaagtaaagaaaaaaaaccatgttggagaggatgagaatcctaatgagtatgtt
atcgaaaagaggcatgataatgatagagataatagctggagattgaaaaggtggttaggc
aataactctgaagaagtgcctgaaaagaagcattatagagaatcagataaggataagcat
gcaggtggtagggaaaaatatgcaagggaaaccaagagaaaataccaaaatggagatgat
gaaactcaagacagaagtacatcgaggaaacatgatgctgtgaaacatcataagatgcac
agttatgagaggaaggagaggcgggctaaggtcaagtcacattatgaagaattaatagca
aagaggagacgttcaagaagtcgagagcgtgaggatagttcaccttcttttccaccaagg
cagcaaaaacgtacttatcaagatggagagcgaaaagagtcatctatgcattctttgaaa
gatagttctagaaaaaagcaccctgatactgataaaagtaaagtatcaactaatggttca
agtagtcaccatcatcgtcatggtggctctacaagtggacttggtggctattctccgagg
aagaggaaaagtgaagctgctgttaagactccttccccatctaagcactctcttgagaag
aaacgtgctggatgggatctaccccctgtaggagcaaataatccttctcccactgttgtt
tcttcaagttttctattatcaaatggtgctgtgttgtccaacatgcatggagtggtctca
accaattctcttgatctagcccttgtgaagcgtcgaccaatatcttttccaaatgatgta
ataacagggaaaaattccaacattgattctgttcaattgacacaagctacccggcctatt
agaaggctttatcttgagaatctacctgcttctgcctctgagaaagctgtgatggattgc
ttcaataacctcttactctctggtcgggtaaatcctatccagcaagctcaaccttgcatc
agctgcgttttgcataaagataggggccaagctcttgtagaattccttaccgctgaggat
gcatcatctgctctttcttttgatggcaatacactatttggctccattgtgaaaattaga
cgacccaaagactatgttgaagttgcaactggtgaaccagagagatcaatggatgctact
gtcacaataagtgatgttgtaattgattcacctcacaagatcttcattggtggaatttca
aaccttctttcttctgagatgcttatggagattgctagtgcgtttggatctttgaaggct
taccactttgaaaccaacgccagcaatgcatcatgtgcttttctggagtattcggatcac
tctgtttccatcaaagcttgtgctggtatgaatggtatgaagctgggaggggaagtactt
acagttgttcaggcaatgcctgatgcatcatcacctttggaaaatgctggtgaaccgtct
tatgggattccagaacatgcaaaaccactgctcagaaagcctacaccagtactagagatt
aaaaatgtgttcgcagcggagtctatttcgtctctatctgacatgacaattgaagaaatt
ttagatgatgtacgatttgaatgtgcaagatttgggactattaaatcaattaatgtagtc
aggcatagcagtgaaaaggatttagcaatcaaattagaagaatgtgaagtcataaatgaa
gtggaatctaaagattttcaagacaccaactctgttagtacaaaatctagtttttcagac
agggctactgaccccaaatctgaagcaacaaattgggttaaatttgatgatgcgaaagaa
ttggaagaatataaagttgatgatggtaccggtgttaatactgataaaaatgctgaagtt
tttgatgatgaatcatgtcaagaacaccttgtgaatgatacagcagttgaaaatgtcggc
ggtaagagcataccttctagtatcatacaagaatatcctgatcaacaggatacatccgat
gacgtacccaaattggatgatgaaatggttgctaacgatacaggtgtggatattgaaaat
aagattgtgggggaaaacacggattcaaaaggcacggtttctgcagttcaggaaggcttt
tctgaacgtgttactcgtttcgaattagttggtccccaaaaggtaactgatacggaagat
gataatgatcatgtatttgaaccgggttctgttcttgttgagtatagacgagccgaagca
tgttgttcagcagcacattctttgcatggacgactgtttgatggcagaatggtgacagtg
gagtatgttgctgagagactatacagagcaagattcacaaaatga

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