Vigna angularis (adzuki bean): 108326020
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Entry
108326020 CDS
T04660
Name
(RefSeq) protein CHROMATIN REMODELING 8 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
108326020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
var03036
]
108326020
03400 DNA repair and recombination proteins [BR:
var03400
]
108326020
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
108326020
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
108326020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
108326020
NCBI-ProteinID:
XP_017414734
UniProt:
A0A0L9TXN7
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All DBs
Position
3:19815984..19825594
Genome browser
AA seq
1224 aa
AA seq
DB search
MEEEEDRILLSCLGVKSANPEDIERDVLEKATKNDSVTVTEAEGSAEEECSDLPENVDPS
TNAKAELHQKLRAVQFEIDAVASTVERLRNVENNEECSDAGEDDLVSSFAEVDSSNNSNL
QCALAADRLRSLKKTKAQLEKELLNLSKDDASKSVEDEQLIFSLVREERKPKRKVKEDKK
SDKSKGKRLKKVSFDDDVDFDTVLDAASAGFVETERDELVRKGILTPFHKLKGFERRFQQ
PETSASRDAAEEENASDLAAASVERAAKSMYEAARSRPTTKLLEPQDAPKLDAPTFPFRR
LRKPLQSSKALDREMELNKDSKRKKRRPLPGRKWTKRVSCDDTHTEESENADGCLDSSSF
ENLEEQGIDLDDHESYVTLEGGLKIPDKIFEALFDYQKVGVQWLWELHCQRAGGIIGDEM
GLGKTVQILSFLGALHYSGMYKPSIIVCPVTLLRQWKREANKWYPKFLVELLHESAQDSA
PRKKRAKSEETDCETNSSSDNDYEKSEPSRNTKKWESLINHVMRSESGLLITTYEQLRIL
GDQLLDIQWGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDF
VFPGKLGVLPVFEVEFAVPIAVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVN
AQLPKKTEHVLFCSLTPEQVSAYRAFLASTDVEQILDGHRNSLYGIDVMRKICNHPDLLE
RDHAFSDPDYGNPERSGKMKVVGQVLNVWKEQGHRVLLFTQTQQMLDIFENFLTSSGHVY
RRMDGLTPVKQRMALIDEFNASSEIFIFILTTKVGGLGTNLTGADRVIIFDPDWNPSNDM
QARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMK
DLFVLNVDGETGSTETSNIFSQISEEVNVIGTQKENKDKNEHSQTAKLDSEDVAVNNDDK
SERGSWEGKGKEKVELYNGVDDGTDILKSLFDANGIHSAVNHDLIMNAHDEEKMRLEEQA
SQVARRAAEALRKSRMLRSHDSVSVPTWTGRSGTAGAPSSVRQKFGSTVNPLLVSKSKVY
DELPSKGTTKLNGFAAGASAGKALSSVELLAQIRGNQEKAIGAGLEHQSSMLSSSTNQAR
SVDVRSSRATASSSGLQPEVLIRQICTFIQQRGGSSDSASIVQYFKERIPSQDLALFKNL
LKEIATLHKGSNGSHWVLKPDYQF
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaggaggatcgaattttgctctcttgtttgggcgtaaaatctgccaatccc
gaagacattgaacgcgacgttttggaaaaggctactaagaatgattcagtgaccgttact
gaggctgaaggtagtgccgaagaagaatgttctgatttacctgaaaatgtcgatccatcg
actaatgctaaagctgaacttcatcagaagttgagagctgttcaatttgaaattgatgcc
gttgcctccaccgttgagcggttgagaaatgtggaaaataatgaagaatgtagtgatgct
ggtgaagacgacttggtgtcgtcgtttgctgaggttgattcctccaacaattcaaatctt
cagtgtgctcttgctgccgataggttgaggagtctgaagaagacgaaagctcaactagag
aaagagcttttgaatttgtccaaggatgatgcttccaaaagtgttgaggatgaacaattg
atctttagtttagttagggaagaacggaagcccaagaggaaggttaaagaagataaaaag
tcagacaaaagcaagggaaaacgacttaagaaagtttcgtttgacgatgatgttgatttt
gatactgttctagatgcagcttctgccggctttgttgaaacagaaagggatgaattggtg
agaaaaggaattttaaccccttttcataagttaaagggctttgagcgccgttttcaacaa
ccagaaacatcagctagtcgtgatgcagctgaggaggaaaatgctagtgatcttgctgct
gccagtgttgaaagagctgccaaatctatgtatgaggcagcaagatctcgcccaaccacc
aagctgcttgagcctcaagatgcaccgaagcttgatgcacccacttttccatttcgcagg
ctcaggaaaccactacaatcttccaaagctctagatagagaaatggagctaaataaagat
tcaaaaaggaagaagaggcggcctctgcctggaagaaagtggaccaagcgtgtttcttgt
gatgatacacatacggaagaaagtgaaaatgcagatggttgcttagatagttccagtttt
gaaaatttagaagaacaaggcattgatcttgatgatcatgaatcttatgtaacgttagaa
ggtgggctgaaaatccctgataagatatttgaagctctgtttgactatcaaaaggttggt
gttcagtggctgtgggaattgcattgccaaagagctggtggaattattggtgatgagatg
ggacttggtaaaactgtccagatcttatcttttcttggtgcactgcactatagtggcatg
tacaaacctagcattattgtctgccctgttacactcttgcgacagtggaaaagggaagct
aacaagtggtacccaaaattccttgtagagcttttacatgaatcggctcaagattcagct
cctaggaagaagcgagctaaatctgaagaaacagactgtgaaaccaatagttcaagtgac
aatgattatgaaaaaagtgaaccatctagaaacacaaaaaaatgggaatccctgataaat
catgtcatgagatcagaatctggattacttatcaccacttatgagcagctcagaatattg
ggggatcagttgcttgatattcaatggggttatgcagttcttgacgaagggcatagaata
aggaatccaaatgccgaagttaccctcgtttgcaagcagctacaaactgtacatcgaatc
ataatgactggtgcacctattcagaataaactgactgaactatggtcattgtttgatttt
gtttttcctggaaaattgggtgttttgcctgtattcgaagttgaatttgcagttcctata
gcagttggtgggtatgcaaatgctacacctcttcaagtatccaccgcatacaggtgtgct
gtggtgctgcgtgatttaatcatgccttatcttctccgacggatgaaggctgatgtgaat
gcccaacttccaaagaagacggagcatgttctattttgcagccttacaccagaacaagta
tctgcttacagagcatttttagctagcactgatgtggagcaaatattggatggacacagg
aattctctttatggaattgatgtgatgcgcaagatctgtaaccaccctgatctacttgaa
agggatcatgccttcagtgatccagattatggaaatccagaacgtagtgggaaaatgaaa
gttgttggtcaagtgcttaatgtttggaaggaacagggtcaccgtgttctcctttttact
caaacccaacaaatgcttgacatttttgagaattttttgacatcttctggtcatgtttat
cggagaatggatggtcttactcctgttaaacagagaatggccttaatagatgaatttaat
gcctcaagtgaaatatttattttcattttaacgaccaaagttgggggtttggggaccaat
cttacaggtgcagatagggtgatcatctttgaccctgactggaatccctcaaatgatatg
caggccagagagcgggcttggcgtattggtcagaagcgggatgtaaccgtgtataggttg
ataacacggggaactattgaggagaaagtgtatcaccgtcagatttacaaacattttctt
acaaataagatattgaagaatccacaacagaaaaggttctttaaggcccgggatatgaaa
gatcttttcgtacttaacgtggatggagaaactgggtcaactgaaacttcaaatattttt
agtcaaatatctgaagaagtgaatgtcattgggacacagaaagaaaataaggataagaat
gaacatagccaaactgccaaactggattctgaggatgttgcagttaataatgatgacaag
tcagagagaggatcttgggaggggaaggggaaagagaaggttgaactttataacggggtt
gatgatggaacagatatattgaaaagcctttttgatgccaatgggatacatagtgccgtg
aaccatgatttgatcatgaatgcccatgatgaggagaagatgagacttgaagagcaagca
tcccaagttgctcgaagagctgcagaagctttacgtaagtcacgaatgctcagaagccat
gatagtgtatctgttcccacgtggacaggaaggtcaggaactgctggtgcaccatcatct
gttcgtcagaagtttggttcaaccgtgaatcccctattggtaagtaaaagcaaggtatat
gacgagttacccagcaagggaacgacaaaattaaatggattcgctgctggggcatccgca
ggtaaagctttatcttctgtcgaacttttagctcaaattcgaggtaaccaagagaaagcc
attggtgctgggctcgaacatcagtctagcatgttgtcaagttccacgaatcaagcaaga
tctgtagatgttagatcttccagggctactgcaagttcatctggattacaacctgaagta
ttgattcggcaaatctgcacttttatacaacagcgagggggtagttctgattcagccagc
atagttcagtattttaaggaacgtattccctcacaagatcttgccctgttcaagaatctg
ttaaaggaaattgcgactctgcataaaggatcaaatggatctcattgggttctgaaacca
gactatcaattctga
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