Vigna angularis (adzuki bean): 108326050
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Entry
108326050 CDS
T04660
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108326050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108326050
Enzymes [BR:
var01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108326050
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
HECT type E3
108326050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
108326050
NCBI-ProteinID:
XP_052730381
LinkDB
All DBs
Position
3:27712531..27721222
Genome browser
AA seq
1556 aa
AA seq
DB search
MGSRGQKRPDMVDELPADKRACSSLDFRPSSSNSSVQTHMNSIVEAHDHDMDTSSSASAS
SQSEGDPEKDSTYGSCDSDDMDQQHNSTLYEYHRRRLSSDHGKFKNIISSLSELTEPSCQ
LAVLTELCEVLSFCTEGSLSSMTSDLLSPLLVKLAKDEKNPDIMLFSIRAITYICDLYPR
SAGFLVQHDAVPALCQRLFAIEYQDVAEQCLQALEKISREQPLACLEAGAIMAVLSYIDF
FSTSIQRVALSTVVNICKKLPSENPSLFMEAVPILCNLLQYEDRQLVENVATCLIKIVER
VGQSSEMLDELCKHGLIQQVTHLLSSNGQTALSQLIYNGLIGLLVKLSSGSLIAFRTLYE
LNISSILREILSTFDLSYGVSTSQLVGGHCNRVYEALKLLNELLPDRAKDQNDQLVLEKE
SFLDNHSDLLQRLGIDLFSMLIQVFNSGASLFVCHACLSVMYKIVSSSKSEVLVELLKNA
NISSFLAGVFTRKDHHMLMLALQIAEIILHNFSDNFLKLFIKEGVFFAIDTLLTPERSSK
LMYPVFSGIQLTSNSSQKSSSRETIKCLCYSFSTGQSPTSSEAKNCKLDKDSVYNLAEHI
KTKYLAPELFDSEKGLTDILQNLRELSNALLSMSTDNGPLGVVEEKINNILYQIMDMLTG
KEQVSTFEFIESGVVKSLVSYLSLGQYTRENKEVQGVCNYNAVIEKRFEALACVCASQHL
SGEIPISILIRNLQTALTSLEAFPIILSSGSKLRNSFATVPNRCSIPYPCLKVRFARGEG
EIFLSDYTEDFHTVDPFSCMHSIEAYLRPKVSPKSTEHSKSSSIQAVLQPESPPIQSPSH
AISVSVEIPVTLGPVDMMTDFPDTQKDQPKLTQLITDQVVIMNAGESSSSRSQGYAVQEL
QMNAEPSPKLEKQDPSFCSNEAAQKLVFYIEGQRLDQKLTLYQAILGHIVKQNDSFSSAK
LWSQVHTITYRRAVESEDIIPPQYHFSPQDISDDKVLAHYQHTPFFSDIFFCELVSDLEK
SSPTYDILFLLKCLERMNRLIFHLMSRERIWAFAKGKVDDLDSLKITVPSVPQNEFVSSK
LTEKLEQQMRDTLAVSVGGMPLWCSQLMTSCPFLFSFEARCKYFKLKAFGQPQVQPHLSH
NGSGAVIDRRLGPGGLPKKKFLVHRNQILESAAKMMELHACHKVVLEVEYDEEVGTGLGP
TLEFYTLVCHEFQKSGLGMWREDVSSFILKSNLQAEEMGIHSFYGLFPRPWSTMQDTSGD
IQFTDVAKKFFLLGQVVAKALQDGRILDLHFSKAFYKLILGKELSLYDILSFDPGLGRVL
QEFQALVIRKSIMESVNGGNSELQYGKSFRDTSIEDLCLDFTLPGYPDIVLASGTDHSMV
NMRNLEDYVSCIVDATVRSGISRQVEAFKSGFNQVFSIEHLQIFNEEEVERMLCGEYDSW
AINELGDNIKFDHGYTASSPPIVNLLEIVREFDHEQRRAFLQFVTGAPRLPPGGLASLNP
KLTIVRKHCNNRADTDLPSVMTCANYLKLPPYSSKERMKEKLLYAITEGQGSFHLS
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtagaggccaaaagcgtccggacatggtggatgaactgcctgctgataagcgt
gcgtgcagttcattggatttcagaccaagttcttcaaactcatcagttcaaacacacatg
aattcaatagtggaggcacatgatcacgacatggatacttcatcgtctgcttccgcttca
agccaatcagaaggagatcccgagaaggattcaacttatgggtcgtgtgattcagatgac
atggatcagcagcataatagcaccctttatgagtatcatagaaggagactatccagtgat
catggaaaatttaagaatatcataagtagcttgagtgaactgactgaaccctcttgtcaa
ttagctgtactcactgaactctgtgaagttttgtccttttgtacagagggttcactatcc
agcatgacttctgacttgttatcaccattactggtaaagcttgcaaaggatgagaagaac
ccagatatcatgttgttttctataagggccataacctatatatgtgatttgtatcctaga
tcagctggttttcttgttcaacatgatgctgttccagccttatgtcaaagattatttgct
attgagtatcaagatgtagctgaacagtgtctccaagcattggaaaagatatcgagagaa
caaccccttgcttgcttagaggctggggcaattatggccgttctcagttatattgacttc
ttctcaacaagcatccagagagtagctctttctactgtggtgaacatatgcaagaagctt
ccttctgaaaacccttcactttttatggaggctgttcctatattatgcaatcttcttcag
tacgaggataggcagcttgtcgaaaatgttgctacatgcttaataaaaattgttgaacga
gttgggcagtcctcagaaatgttggatgagctttgtaagcatgggctgattcaacaggtc
acgcatcttttaagttcaaatggtcagactgccctatctcaattaatttacaatggattg
ataggattacttgtcaaactttcatctggatcacttatagccttcaggactttatatgaa
ctcaatataagcagcatattgagagaaatattatctacatttgacctctcatatggagta
tcaacgtcacagctcgttggtggacactgtaatcgggtatatgaagcactcaaactgcta
aatgaacttctccctgatcgggctaaagatcagaatgatcaactggtgctagaaaaagaa
tcctttctagataatcactcagatctcctgcaaaggcttggaatcgatttgttctccatg
ttaatccaggtgttcaattctggtgcaagtttatttgtttgccacgcatgtctgtctgtt
atgtacaagatagtcagttcaagtaaatctgaggtgcttgttgaattgctaaaaaatgcc
aatatttcaagttttttggctggagttttcactagaaaggatcaccacatgctaatgtta
gcattacaaattgctgagattatccttcacaatttttcagataatttcttaaagttgttt
ataaaggaaggagtcttttttgccattgatacactactaacaccggaaagatcttcaaaa
ttgatgtacccggtgtttagtggcattcaactgacatcgaactctagtcaaaagtcttcc
tcaagagagaccatcaagtgcttatgttattcattttcaactggccaatctcctacatca
tcagaagccaaaaattgcaaacttgataaagattctgtttataatctagcagagcatata
aagacaaaatatttagctccagaattatttgattctgagaaaggattgactgatatttta
caaaatcttagagaactgtctaatgctttgttgagcatgtctactgacaatggtcctctt
ggtgtggttgaggagaagatcaataatatcttgtatcaaattatggacatgcttactggc
aaggaacaagtttctacttttgaatttattgaaagtggagttgtgaaatcacttgttagt
tatttatctctgggtcagtatacgagggaaaacaaagaggtacagggtgtctgtaattat
aatgctgtcatagaaaaacgatttgaggctttagcttgtgtgtgtgcttctcagcatctc
tctggtgaaatacccatttctatattaatcaggaacttgcaaactgcactaacttcattg
gaagctttccctattattctgagcagtggatcgaaactcagaaattcatttgctactgtt
cctaataggtgttcaattccttacccttgtctgaaagtacgttttgcaaggggcgaggga
gagattttcctgagcgactacactgaggattttcataccgttgatcctttttcttgtatg
cattctattgaagcatatctaaggccaaaggtcagtccaaaaagcacagagcattctaaa
tcatcatccatccaagcagtgttgcaacccgaaagtcctccaattcaatcaccatcacat
gcaatttcagtctcagttgaaattcctgttactttggggcctgttgacatgatgacagat
ttccctgatacacagaaggatcaaccgaagttgacgcaactcataactgatcaagtagtc
atcatgaatgctggggaatcctcctcctctagaagtcagggctatgccgtacaagaactg
caaatgaatgcagaaccaagcccaaaactagaaaaacaggatccttcattttgtagcaac
gaagctgctcaaaagcttgtcttttacattgaaggacaacgtctggatcaaaaattgact
ttatatcaggcaattcttggccatatagtaaaacaaaatgattccttttccagtgcaaaa
ctgtggagtcaggtgcatacaataacctacagaagggctgttgaatctgaggacataata
cctccacaatatcacttttcacctcaggatatctctgatgataaagttttagctcattat
cagcatactccatttttctcagatatattcttttgtgaacttgtttctgatctggagaag
tcaagtccaacttatgatattttgtttcttcttaaatgcttggaaagaatgaacagactt
atatttcaccttatgtctcgtgaaaggatttgggcttttgccaaagggaaagtggacgac
ttggatagcctaaaaataactgttccttctgtcccacaaaatgagtttgtaagcagtaaa
ttgacagagaagctagagcaacagatgagggacactttggctgtctccgttggtggtatg
ccattgtggtgtagtcaattaatgacatcatgtcctttcttatttagtttcgaggcaaga
tgcaagtacttcaaattgaaagcatttggtcagccacaagttcaacctcacttgtctcac
aatggctcaggagcagtgattgatagacgattgggccctggtggattgccaaaaaagaaa
tttttagttcatcgcaaccagattttggaatctgctgcaaaaatgatggagctgcatgcc
tgtcacaaagttgttcttgaagtggaatatgatgaagaagtgggcactggtcttggacca
accttggaattttataccttagtctgccatgagttccagaaatctggcttgggcatgtgg
agagaagatgtttcttcgttcatcctcaagtcaaatttgcaggctgaggaaatgggaatt
cattctttttatggactctttccccgtccgtggtcaacaatgcaagatacatctggtgac
atacagttcactgacgtagcaaagaaatttttccttctaggccaagttgttgctaaggca
cttcaagatgggaggatcttagatctccacttctccaaagctttctataaacttattctt
ggaaaggaactctctctttacgacatactatcctttgatcctgggcttggtagggtgctg
caagagtttcaagcactagttatcaggaaaagtattatggaatctgtcaatggagggaat
tctgagttgcaatatggaaaaagctttcgagatactagtattgaagatctctgtcttgat
tttacccttcctgggtatcctgatattgttcttgcttcagggactgatcattccatggta
aatatgagaaatctagaggattatgtttcatgtattgtcgatgcaacagtgaggtctgga
atttcaagacaggtggaagcttttaaatctggctttaaccaggttttctccattgaacat
cttcagattttcaatgaagaagaagttgagcgaatgctttgtggagagtatgactcttgg
gcaatcaacgagcttggagataacattaagtttgaccatgggtacactgctagcagtcct
cccattgttaatttgttggagattgtccgggagtttgatcatgaacagcggcgagcattt
ctgcagtttgtgactggtgcacctcgacttcctccaggagggttggcatctctgaatcca
aagttaactattgtccgaaagcattgtaacaaccgggcagacacagatctaccaagcgtg
atgacttgtgctaattatctcaagctacctccgtactcatcaaaagagagaatgaaagaa
aagttgttgtatgccataacagagggtcaaggatctttccacctttcgtaa
DBGET
integrated database retrieval system
