Vigna angularis (adzuki bean): 108326053
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Entry
108326053 CDS
T04660
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108326053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108326053
Spliceosome [BR:
var03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108326053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
PRP4
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
WD_LRWD1
Beta-prop_Vps41
Beta-prop_SCAP
eIF2A
Beta-prop_Nup120_160
WD40_like
Motif
Other DBs
NCBI-GeneID:
108326053
NCBI-ProteinID:
XP_017414786
UniProt:
A0A0L9TVL9
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Position
3:complement(37617530..37623055)
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AA seq
566 aa
AA seq
DB search
MEVEKENVTAEPSLPASDGQDTISDNASLPHSIQPIIPPVIAPSVVPPLAPIPTIPPPRP
LAPLPVRPPVIRPPVPQNGEVRSSDSDSDNDDSNARINQGTGEYEISEESRLVRERQEKA
MQELMMKRRAAALAVPTNDMAVRARLRHLGEPITLFGEREMERRDRLRMIMAKLDAEGQL
EKLMKAHEDEEAAASAPKDEAEEALQYPFYTEGSKALLDARIYIAKYSLARAALRIQRAQ
RRRDDPDEDMDAEIDWALRQAGNLSLEFSEIGDDRPLSGCSFSRDGKWLATCSLTGASKL
WNMPKIKKHSTLKGHTERATDVAFSPVHDHLATASADRTAKYWNDQGSLLKTFEGHLDRL
ARIAFHPSGKYLGTASFDKTWRLWDIETGEELLLQEGHSRSVYGLAFHRDGSLAASCGLD
SLARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSFYTIP
AHSNLISQVKFEPQEGYFFVTASYDMTAKVWSGRDFKPVKTLSGHEAKVTSVDVLGDGGH
IVTVSHDRTIKLWSSNTTNEQAMDVD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggagaaggaaaatgttactgcagaaccatctttacccgcctctgatggtcaa
gatactatttctgataatgcatctctaccccattcaatacaacctattattccacctgtt
attgcaccttctgttgtgcctcctttagctccaattcccacaattcctccccctcgccca
ctggcaccacttccagttcggccaccagtcattaggccacctgtgccacaaaatggcgag
gttagatcaagtgactctgactcggacaatgatgactcaaatgcaagaattaaccagggg
actggagagtatgagatatctgaagagagtagactggtgagagagcggcaggaaaaggca
atgcaggaactcatgatgaagaggcgggcagctgctcttgccgttcctacaaatgatatg
gctgtgcgagctcggcttcgacatcttggtgagccaataactctgtttggtgagagagag
atggagaggcgggacaggttgcggatgattatggcgaagctagatgcagaaggtcagctg
gagaagctgatgaaagctcatgaggatgaagaggctgcggcttctgctccaaaagacgag
gctgaggaagcactgcagtatcctttttacactgaagggtcaaaggctctcctggatgcc
agaatttatattgctaaatattctttggcaagggcagcattacggattcaacgtgcacag
agaagaagggatgatccagatgaagatatggatgcagagatagattgggcattgaggcag
gctgggaatttgagtctcgaattcagtgaaattggagatgatcggcccctttctggttgc
tccttctcaagggatggaaaatggcttgccacctgttctctgactggcgcttccaagttg
tggaacatgcccaaaataaaaaaacattccaccttgaaggggcacacagaacgtgctaca
gatgttgctttttctcctgttcatgatcatttagcaactgcctctgctgatcgaacagca
aagtattggaatgatcaaggatcacttttgaagacatttgagggtcatctggaccgtctt
gcccgcattgccttccatccatcagggaagtacctgggaactgccagttttgacaagaca
tggagattatgggacatagaaacaggggaggagttgcttcttcaagaaggacatagtaga
agtgtgtatggcctggctttccaccgcgatggatcattagctgcatcttgtggactagac
tctctggctcgtgtttgggacctccgaactggaagaagtattcttgcactggaaggtcat
gtcaaaccggttcttggcatcagtttttcacctaatggatatcatctagccactggtggt
gaagacaacacgtgtcggatttgggatttgaggaagaagaaatccttttatactattcct
gctcactcgaatttaatatcacaagttaaatttgaaccacaagaaggttactttttcgta
actgcttcatatgacatgactgctaaggtttggtcgggccgtgactttaagcctgtgaag
acactatctgggcatgaagcaaaagttacctctgtggatgttcttggagatggtggccac
attgttaccgtctcccatgatcgcaccataaaactgtggtccagcaatacgactaacgaa
caagcaatggatgttgattaa
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