Vigna angularis (adzuki bean): 108326080
Help
Entry
108326080 CDS
T04660
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108326080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108326080
03009 Ribosome biogenesis [BR:
var03009
]
108326080
04131 Membrane trafficking [BR:
var04131
]
108326080
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
var04147
]
108326080
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108326080
Ribosome biogenesis [BR:
var03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
108326080
Membrane trafficking [BR:
var04131
]
SNARE
SNARE associated proteins
Others
108326080
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108326080
Exosome [BR:
var04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108326080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_28
AAA_17
Mg_chelatase
nSTAND3
ATPase_2
Parvo_NS1
AAA_18
Vps4_C
IstB_IS21
ABC_tran
AAA_7
Viral_helicase1
NB-ARC
AAA_24
TsaE
DUF815
NACHT
Zeta_toxin
Sigma54_activat
AAA_lid_PRS2_C
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
108326080
NCBI-ProteinID:
XP_017414837
UniProt:
A0A8T0KU77
LinkDB
All DBs
Position
3:complement(17759439..17763547)
Genome browser
AA seq
809 aa
AA seq
DB search
MANQPESSDAKGTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVALHPDTMDKLQLFRGD
TILLKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHACPDVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPVKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRKRDN
PEAMEEDIEEEEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFS
DASAGGAGAGAASDPFASAGGADEDDLYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccaacccgagtcctccgatgctaagggaacaaagagagatttcagtactgcg
atcttggagcgcaagaaggcgcccaaccgactcgtcgttgacgaagccgtaaacgatgac
aactccgtcgtcgcgctccaccctgataccatggataagctccagcttttccgcggagac
acaattcttctcaagggcaagaagagaaaggatactgtctgtattgcccttgccgatgat
acctgtgaggagcccaagatacggatgaacaaggtcgtcaggagcaaccttagggttaga
ctcggtgacgttgtctccgttcacgcatgccctgatgttaagtacggaaagagagtgcac
attcttcccgtcgatgacaccattgagggcgttactgggaatctcttcgatgcttacttg
aagccttatttccttgaggcatatagaccagtgaggaaaggtgacttgtttcttgtgaga
ggtgggatgagaagtgtagagttcaaggttattgaaaccgatcctgcagagtattgtgtt
gttgctcctgatactgagatcttctgtgagggagagcctgttaaaagggaagatgagaat
cggttagacgaggttggttatgacgatgttggtggtgttagaaagcagatggcacagatt
agggaactggtggaactgccattgaggcatccacagttgttcaaatctattggtgttaag
ccacctaaaggaattctgctatatggaccccccgggtctggtaagactttgattgctcga
gctgttgcaaatgaaactggagccttctttttctgcattaatggtcctgagatcatgtca
aaattggctggtgagagtgaaagcaatctgaggaaggcatttgaagaagctgagaagaat
gcaccctctattatcttcattgatgagatagattcgatagctccaaagagggagaagact
cacggggaagttgagaggagaattgtttcccagctcttgactctcatggatggtcttaaa
tcacgtgcccatgtaattgttattggagccacaaatcgtcccaatagcattgaccctgcc
cttaggaggtttggtaggtttgatcgggagatagatattggcgttccagatgaggttggt
cgccttgaggttcttcgtatacacacaaaaaatatgaagctttctgatgatgttgattta
gaaaggattgctaaggacacacacggatatgttggtgctgatctggctgctttgtgtact
gaagccgcacttcaatgcatcagagagaaaatggacgtcattgacttggaagatgagtcc
attgatgctgagatactaaactcaatggcagtgtcaaatgagcatttccagactgctctt
ggaacaagcaatccttctgctctccgagaaacagtcgttgaagtgcccaacgtcagctgg
gaagatattggtggtcttgagaatgtgaagagagaacttcaagagactgttcaatatcca
gtggaacaccctgagaaatttgagaagtttggaatgtcaccttcaaaaggggttcttttc
tatgggcctccgggttgtggtaaaacccttttggcaaaggctattgccaatgaatgccag
gcgaacttcatcagtgtcaaaggtcccgaactacttaccatgtggtttggagaaagtgag
gctaatgtgagggaaatttttgataaagctcgtggttctgctccttgtgttctattcttt
gatgaacttgactctattgcaactcagaggggcagcagcgtaggagatgctggtggtgct
gctgacagggttttgaatcaattgcttacagagatggatggtatgtcagcaaagaaaacc
gtgttcatcattggggccactaatcgaccagacattatagatcctgctcttctgcgaccg
ggccgtctggatcaattgatttatatcccactcccagatgaggattcccgtcatcagata
tttaaagcttgtttgagaaaatctcctgtttcaaaagatgttgaccttagagctctggcc
aagtatactcagggcttcagtggtgcagatatcactgaaatttgccagcgtgcatgcaag
tatgctataagggagaacattgagaaggacattgagagagagaggaggaaaagagataac
cctgaggcaatggaagaggatattgaagaggaagaggtagctgaaatcaaggcagctcat
tttgaggagtcgatgaaatatgcacgaaggagtgtaagtgatgctgacattcgtaagtac
caggcatttgctcagacattgcagcagtcaagagggtttggatccgagttcaggttttca
gatgccagcgctggtggtgctggtgctggcgctgcatcagacccttttgcaagtgctggt
ggagctgatgaagatgatctttacagttag
DBGET
integrated database retrieval system
