Vigna angularis (adzuki bean): 108326104
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Entry
108326104 CDS
T04660
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108326104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108326104
03012 Translation factors [BR:
var03012
]
108326104
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108326104
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108326104
Translation factors [BR:
var03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108326104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
nSTAND3
AAA_22
AAA_19
ATPase
NPHP3_N
T2SSE
Dicer_dimer
PhoH
Motif
Other DBs
NCBI-GeneID:
108326104
NCBI-ProteinID:
XP_017414863
UniProt:
A0A8T0KP67
LinkDB
All DBs
Position
3:complement(3020359..3033382)
Genome browser
AA seq
1193 aa
AA seq
DB search
MLSVTQPSCIPKTLKPFIPLPSPAMKDRRTLSSYGSVYIPPHLRLRSVANFNNSPSPLRA
KPHENPTQTISTLQPPFTERVTDKARSLFVSAYDDTVSEEGSDREFELPSLVHASKFACL
PNASLDDNTDEWKRKFTVLLNDKSKHELISRDKKDRRDFEEIAVIASGMGLYSHMYAKVV
VFSKVPLPNYRYDLDDRKPQREVSLSFTTFTRVKAHFEEYLSQKSRMNKSCLDLSSARSS
SNCSIGMDEGLFEQPEPLASSKAVIEKIVRQRSLKMRAQQQAWQESAEGNRMLEFRRSLP
AYKKKEEILSVISRNQVVIISGETGCGKTTQIPQFILESEIESVRGAACNIICTEPRRIS
AMSVSERVAFERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRKLKGVTHV
IVDEIHERGMNEDFLLIILKELLPRRPELKLILMSATLDAKLFSSYFNGAPTMFIPGYTY
HVRTHFLENILEMTGYRLTPCNQIDDYGQEKMWKMNRQVPRKRKSQIASAVEDAIRAADF
KDYSPHTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISCLKEKLLTH
TVLGDPNRVLLLTCHGSMASSEQRLIFEEPEAGVRKIVLTTNIAETSITINDVVFVLDCG
KAKETSYDALNNTPCLLPTWISKVSSQQRRGRAGRVQPGECYHLYPRCVYDAFSEYQLPE
ILRTPLQSLCLQIKSLRLESISEFLSRALQSPEILAVQNAIEYLKIIGALDENENLTILG
RYLTMLPMEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFCG
AYSDHLALVRAYEGWKDAEMDMGGYEYCWKNFLSLQSMKAIDALRREFICLLKDTGLVDS
NAASCNAWSSDLNLIRAVICYGLYPGIGSVVNNEKSFSLKTMEDGQVLLYSNSVNARETK
IPYPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGSLLKGDADNHLKMLGGYLEFFMDPS
IVEMYQSIRRELDAFIQSKLLFPRMGIQWYHDLLSTVRLLISNDQCEGRFVFGRQVHKPS
KKSIMLASHPTLVSRTESGPGGDNSKSQLQTLLTRAGCAAPVYKTKQLKNNQFQAAVEFN
GMQIMGQPCNNKKSAEKDAAAEALQWLMGGKQAGREYINHLSMLLKKSKKDHN
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgctctcggtcacgcaaccttcgtgcattcccaaaaccctaaaacccttcattcctctt
ccgtctccggccatgaaggaccgccgcacgctgtcctcctatggctccgtttacattccg
ccgcacctccgcttgcgctccgtcgccaatttcaacaactcaccctctccgcttcgcgcc
aaaccccacgaaaaccctacacaaaccatttctactctgcaaccgccgttcacggagcga
gttaccgataaggcacgctcgctcttcgtttctgcttatgacgataccgtttccgaggaa
ggctccgatcgtgaattcgaacttccctcactagtgcatgcttccaaatttgcttgtttg
ccgaatgcttcgcttgatgataacactgacgaatggaagcggaaatttaccgtgctctta
aatgacaagagtaagcacgaattaatctcgagggataaaaaggataggcgtgattttgag
gaaatagcagttattgcaagcggaatggggttgtatagccatatgtatgctaaggttgtt
gtcttcagtaaggttccacttccaaattacagatatgatttggacgatcggaagcctcag
agggaggtgagcttgtctttcaccacatttacccgtgttaaggcgcattttgaggaatat
cttagccaaaaatccaggatgaacaaaagctgtttggatttgtcatctgcaagatctagc
agtaattgcagtattggtatggatgaggggctttttgagcaacctgagcctctagcatca
agtaaggctgttatagagaaaattgttcggcagaggagcttaaaaatgcgtgctcagcag
caagcttggcaggaatctgctgaaggaaatagaatgctagaatttcgcagaagtctccca
gcttataaaaagaaagaagaaatattatcagtcatatctaggaatcaggtagttataatt
tcaggcgaaacaggttgtggcaagacaacacaaattccacaattcattttagaatctgag
atagaatcagttcgaggagctgcttgtaatatcatatgcacagagccaagacgcatttca
gccatgtcagtttctgaaagagtggcctttgagaggggagagaaattgggcgaatctgtt
ggatataaagttcgacttgagggtatgaaagggagagatacccatcttctcttttgcacc
acaggcattttattaagaagattactggctgatagaaagttaaaaggcgtaactcatgtt
attgtggatgaaattcatgagcgagggatgaatgaagattttctgcttattatccttaaa
gaactccttccccgtcggccagaactgaaactgattttgatgagtgctaccctagatgcg
aagctcttttcttcatactttaatggggctccgactatgtttattcctggctacacatac
catgtcagaacccattttttggagaacattcttgaaatgacgggctacagattaactcct
tgtaatcaaattgatgattatggtcaagaaaagatgtggaaaatgaacagacaggtccca
agaaagaggaaaagtcaaattgcttctgccgtagaggatgcaattagagctgctgatttc
aaagattacagcccacatacacaggagtctttgtcatgttggaatcctgactgcattggt
tttagtctcatagaatatattttgtgcaatatatgtgagaatgaaagacctggtgctgtt
ttggttttcatgactggatgggatgatataagctgtctcaaagagaaactcctgacgcac
actgtcttgggggatccaaaccgtgttctgttgcttacatgtcatggctcaatggctagc
tcagagcagagattaatatttgaagagcctgaagctggagtaagaaaaatagtgctaaca
acaaatatcgctgaaaccagtatcacgataaatgatgttgtttttgttcttgactgtgga
aaagcgaaagaaacatcgtatgatgctctgaacaacacaccttgtctgcttcctacatgg
atttctaaggtttcttctcaacaaagaagaggaagagctggtcgggtacaaccaggagag
tgttaccatctctatcctagatgtgtgtatgatgcattttcggagtatcaattgccagaa
attttgagaacacctctgcagtccctctgtttacaaattaaaagtttgagacttgaaagc
atatctgagttcttgtccagggctttgcagtctcctgagatacttgcggtacaaaatgca
attgaatatttaaaaataattggagctttggatgagaatgagaatctcactattctaggg
cgctatttgacaatgcttcctatggaacccaaacttggcaagatgctaatattaggtgct
attttcaattgcctggatcccatattaactgttgttgctggtcttagtgtgagagatcct
tttctaacaccgttggataaaaaagatcttgcagaggctgcaaaatctcaattctgtggt
gcatatagtgaccaccttgcccttgtaagggcatatgaaggttggaaagatgctgaaatg
gacatgggtggatatgaatactgttggaaaaattttctttccttacaatccatgaaagct
attgatgctcttcggagagagttcatatgcctgctcaaggataccggattagttgatagc
aacgcagccagctgcaatgcatggagctctgatctaaatcttatccgagcagttatttgc
tatggcctatatcctggaattggttctgttgtgaataatgagaaatcattctctttgaaa
acaatggaggatgggcaagtgctcctatattcgaactcagtgaatgctcgggaaactaaa
attccatatccatggcttgtttttaacgagaagataaaagtgaactcggtttttctccgc
gactcaacagctgtgtctgattcagtggtgcttctgtttggaggaagcttattgaaagga
gacgctgataaccatttaaaaatgttgggaggatatcttgagttttttatggatccgagt
attgttgaaatgtaccagagtataaggagagaacttgatgccttcattcagagcaaacta
ctttttccaagaatgggcatacagtggtatcatgatctcctatctacagtacggctgctg
atttccaatgaccaatgtgaaggtagatttgtatttggtcgccaggtccataaaccatct
aaaaaatctattatgttggcctcacacccaaccttggtttcaaggactgagagtggacct
gggggagataattctaaaagtcagctccaaacattgcttacgagagcaggatgtgcagcg
cccgtctacaagactaaacaattgaagaacaatcagtttcaggctgcagttgaattcaat
ggaatgcagataatgggtcaaccttgtaacaataaaaagagtgcagaaaaagatgctgca
gctgaggcattgcagtggctgatgggtggaaagcaagcaggcagggagtatatcaatcac
ttgtcaatgttgcttaagaaaagtaagaaggatcacaattaa
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integrated database retrieval system
