Vigna angularis (adzuki bean): 108326154
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Entry
108326154 CDS
T04660
Name
(RefSeq) chaperonin CPN60-2, mitochondrial isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108326154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108326154
03110 Chaperones and folding catalysts [BR:
var03110
]
108326154
03029 Mitochondrial biogenesis [BR:
var03029
]
108326154
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
var04147
]
108326154
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
108326154
Messenger RNA biogenesis [BR:
var03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
108326154
Chaperones and folding catalysts [BR:
var03110
]
Heat shock proteins
HSP60 / Chaperonin
108326154
Mitochondrial biogenesis [BR:
var03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
108326154
Exosome [BR:
var04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108326154
Exosomal proteins of other body fluids (saliva and urine)
108326154
Exosomal proteins of breast cancer cells
108326154
Exosomal proteins of colorectal cancer cells
108326154
Exosomal proteins of bladder cancer cells
108326154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
108326154
NCBI-ProteinID:
XP_017414957
LinkDB
All DBs
Position
3:complement(35475745..35480291)
Genome browser
AA seq
575 aa
AA seq
DB search
MYRFASSLASKARIARSGSKQLGSTLSWSRNYAAKDIKFGVEARALMLKGVEELADAVKV
TMGPKGRNVVIEQSFGGPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGISMAVDTVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITISDGKTLYNELEVVEGMKLDRGYISPYFITNDK
NQKCELEDPLILIHEKKISSINAVVKVLELALKRQRPLLIVAEDVESDALATLILNKLRA
GIKVCAIKAPGFGENRKSALQDLAVLTGGALITEELGLKLEKVDLDMLGTCKKITISKDD
TVILDGAGDKKSIEERCDQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLQTANFDQKIGVQIIQNALKT
PVLTIASNAGVEGAVVVGKLLEQDDHDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAA
SVSSLMTTTEAVVSELPKDDKDTPAMAGGMGGMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgctttgcttctagcctcgcctccaaagcaaggattgctaggagtggcagcaaa
cagcttgggagtacgttgagctggagccgaaattatgcggctaaggacattaaatttggt
gtggaggctcgggctctgatgcttaagggtgtcgaagagcttgcagatgctgtcaaagta
accatgggtcccaaggggcgtaatgtggttattgagcaaagttttggtggccctaaagta
actaaagatggagtaactgttgcaaagagcattgaattcaaggataaagttaagaatgtt
ggcgccagtctcgtaaagcaggttgctaatgctactaatgatgtggctggtgatggaacc
acatgtgccacggtccttacaagagccatatttactgaaggctgcaaatcagttgcagct
ggaatgaatgcaatggacctgaggcgtggtataagtatggctgttgacactgttgtaaca
aacttgaaaagcagagctcggatgattagcacatctgaagaaatagcacaggttgggaca
atatctgctaatggagagcgagaaattggtgagctgattgccaaagctatggagaaagtt
ggcaaagagggagtcatcacaatttcagatggcaaaactttatataatgagttggaggtt
gttgaaggaatgaagcttgacaggggctacatatctccttattttataacaaatgataag
aaccagaaatgtgaacttgaggatcctctcattctaatccatgagaagaaaatctcaagt
ataaatgctgtagttaaagttttagagttagctttgaagagacaaagaccattgttaatt
gttgctgaagatgttgaaagtgatgcacttgcaacacttattctaaataagcttcgtgct
ggaattaaggtatgcgctattaaagcccctggttttggtgaaaataggaagtccgctctt
caagatcttgcagttctaacaggaggagcacttatcactgaagagcttggcttgaagctt
gaaaaagtggacttggatatgcttggcacttgcaaaaaaataacaatttctaaggatgac
actgtcattcttgatggagctggtgacaagaaatcaattgaggaaagatgcgaccagatt
aggtcagcaattgaaaatagcacctcagattatgacaaggaaaagttacaggaaagattg
gccaagctttctggtggtgttgcagtgctcaagattggaggagccagcgaagccgaagtt
ggtgaaaagaaggatagggtgacagatgccttgaatgcaactaaggctgctgttgaagag
ggcatagtacctggtggtggtgttgctcttctatatgcatcaaaagagttggataaactt
caaactgctaactttgatcagaagattggtgtccagattatccaaaacgctttaaagaca
cctgtgctcacaattgcatcaaatgcgggagttgagggtgcggttgttgttggcaaacta
ttggaacaagacgatcatgatctaggatatgatgctgccaagggtgagtatgtggatatg
gttaaatccggaatcattgacccattgaaggtgattaggacagccttggttgatgcagca
agtgtatcatctttgatgacaacaactgaagctgtcgtgtctgaacttcctaaggatgat
aaagatactcctgctatggcaggtggaatgggtggcatggattattaa
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