Vigna angularis (adzuki bean): 108326158
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Entry
108326158 CDS
T04660
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
var01009
]
108326158
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108326158
Enzymes [BR:
var01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108326158
Protein phosphatases and associated proteins [BR:
var01009
]
HAD phosphatases
Fcp/Scp phosphatases
108326158
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108326158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
ZMYM4
Motif
Other DBs
NCBI-GeneID:
108326158
NCBI-ProteinID:
XP_017414961
UniProt:
A0A0L9TU06
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Position
3:40343940..40350811
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AA seq
695 aa
AA seq
DB search
MAKNNAVSVKDAVFKLQMLLFEGIQNEDQLFAAGSLMSRSDYEDIVTERSITNVCGYPLC
CNALPTERPRKGRYRISLKEHKVYDLQETYLFCSSNCVVSSKAFAGSLQSERCLALDPEK
LNNILKLFENLNLEQTENVRKDGDLGLSNLKIQEKTVTSTGEVSLEEWVGPSNAIEGYVP
KPRERESKGSRKSVKKGSKAGHDKSNNDKDLVNNEMNFVSTIIMQDEYSVSKASPGQTDT
TAVDRQPEKVGLKMVRKDEDSIQDLSSSFKSGLNLSTSEKEKEVSKSYEAVFKSSPNLAS
KKKDAHSVPISERQYDQEKHNSSRKSVQGKGETSRVTANGGASTSNFDPDNVKEKFQVEK
VGGSCETKLKSSLKSAGQKKPSRTVTWADEKINSAGNKDLCEVKEFGDISKEYESLGNVD
VTDDEYMLRQASAEACAIALSQASEAVASGDSDVTDAVSEAGIIILPHDAVEEGTIEDAD
ILQNDSVTLKWPRKPGVSDIDFFESDDSWFDAPPEGFSLTLSPFATMWNAIFSWMTSSSL
AYIYGRDESFHEEYLSVNGREYPCKVVLSDGRSSEIKQTLAGCLARAFPALVAGLRLPIP
ISTLEQGMACLLETMSFVDALPPFRTKQWQVVTLLFVDALSVCRIPALISYMTDRRSLFH
KVLSGSQIGIEEYEILKDLVVPLGRAPHISAQSGA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaacaacgccgtttctgtcaaagatgcagttttcaaattgcaaatgttactc
tttgaaggcattcaaaatgaagatcagctgtttgctgctggatctttgatgtcaaggagt
gactatgaagatattgtaacggaacggtccatcacaaatgtttgtggttacccactctgc
tgcaatgctttgccgactgagcgacctcggaagggtagataccggatttcactgaaggag
cacaaggtctatgacctacaagagacttacctattttgttcttcaaattgtgttgttagc
agcaaagcttttgctgggagcttgcaatcggagagatgcttagctttagacccagaaaag
ctaaacaacatacttaagttatttgagaatttgaatctggaacagacagaaaatgtgcga
aaggatggagatttaggtttgtccaatttgaaaattcaggagaaaactgtaacaagcact
ggggaggtgtctctggaggagtgggttggaccatcaaatgcaattgagggatatgtgcca
aaaccaagggagcgtgaatctaagggttcacggaaaagtgttaaaaaagggtccaaagct
ggtcatgacaagtcaaacaatgacaaagatttagttaacaatgagatgaacttcgtgagt
actattattatgcaagatgagtatagtgtttcaaaagcatccccaggtcaaacagataca
acagctgtagacaggcaacctgaaaaggttggccttaaaatggtcagaaaagatgaggat
agcattcaagatctgtcttcatcttttaagagtggtttaaatttaagtacctcagaaaaa
gagaaggaagtatccaaatcatatgaagcagtgttcaaatcctctccgaatctggctagt
aagaagaaagatgcgcattctgttcccatatcagaaagacaatatgatcaggaaaagcat
aattcctcaaggaaatcagtgcaaggtaaaggggagacaagtagagttactgctaatggt
ggtgcttccacttccaattttgatcctgacaatgttaaagagaaattccaagtagaaaaa
gtgggtggatcgtgtgagactaaactcaaatcttcccttaaatctgctggtcaaaagaaa
cctagccgcactgttacttgggcggatgagaaaatcaatagtgctgggaataaagatctt
tgtgaggttaaagaatttggagatattagtaaagaatatgagtcactaggtaatgtagat
gttactgatgatgagtatatgctacgtcaagcatcggcagaagcttgtgcaattgcatta
agccaagcatcagaagcagttgcatctggagactcggacgtcactgatgctgtttctgaa
gctggaattattatattgccgcatgatgctgttgaggagggtactatagaggatgctgat
atactacaaaatgattcagttactctgaaatggccaagaaagcctggagtttcagacatt
gatttctttgaatctgatgactcatggtttgatgctccaccagagggtttcagtttgact
ttatcaccttttgcaactatgtggaatgccatcttttcgtggatgacatcatcttctttg
gcatatatatatggaagggatgaaagttttcatgaagaatacctatcagtcaatgggaga
gaatatccttgcaaagttgtcttgtcagatggtcggtcatctgaaataaagcaaacatta
gcgggttgtcttgctcgagcttttcctgcacttgttgctggtcttcgactgccaatacca
atatccaccttggagcaagggatggcatgcttgctggagacaatgtcatttgtggatgca
cttccacctttcagaacaaagcaatggcaagtggttactcttttgtttgttgatgcattg
tccgtttgtagaatacctgctcttatctcatacatgacggataggaggtctttgtttcac
aaggttttgagtggttctcaaataggtatagaagaatatgagattttgaaggatcttgta
gtaccactgggccgggcacctcatatctctgcccaaagtggggcatga
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