Vigna angularis (adzuki bean): 108326214
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Entry
108326214 CDS
T04660
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03013
Nucleocytoplasmic transport
var03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108326214
03015 mRNA surveillance pathway
108326214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108326214
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108326214
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108326214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
108326214
NCBI-ProteinID:
XP_052731166
LinkDB
All DBs
Position
3:complement(29911821..29920407)
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AA seq
488 aa
AA seq
DB search
MAEPSTAAATTTAVDPPPPVTKRWADEADEETEASSTATATEASSVNLDSLKIEDNDKNP
PKLLDDPDDSSIQKVTSGETPYTSAAKFEDLNLSPELLKGLYVEMKFEKPSKIQAISLPM
ILNPPHRDLIAQAHNGSGKTTCFVLGMLSRVDPKVQAPQALCVCPTRELANQNIEVLRKM
GKYTGIASECAVPTDSNALSIAKRAPIMAQVVIGTPGTIKKWMSFKKLGAARLKILVFDE
ADQMLAEDGFKDDSLRIMKEIEKVNSNCQVLLFSATFNDTVKNFVSRTVKEDHNKLFVKK
EELSLDAVKQYKVYCSDELAKIEVIKDYIFEIGENVGQTIIFVRTRNSAQMLHKSLVDMG
YEVTSIQGALGHDEREKIVKEFRDGLTQVLISTDLLARGFDQQQVNLVINYDLPMKHCSE
PDCEVYLHRVGRAGRFGRKGAVFNLICDQKDERLMSKIENHFGTRVAEVRAQSVEDYKRA
LKEAGLLQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaccatccaccgccgccgccaccaccaccgcggtggaccctccgccgccagtt
accaaaagatgggctgacgaagcggacgaagaaaccgaagcctcctccaccgccaccgcc
actgaagcatcttccgtcaacctcgattcattaaaaatcgaagacaacgataagaaccct
cccaaactcttggatgaccccgacgattctagcatccaaaaggttacctctggagaaacg
ccgtacacgtcggctgcgaagttcgaggacttaaacctctcgccggagcttctgaaaggg
ctctacgtggagatgaagttcgagaagccgagcaagatccaggcgataagtttgccgatg
atcctcaacccgccgcaccgcgacctcatcgcgcaggcgcacaacgggtctgggaagacc
acgtgcttcgtgcttgggatgctcagccgcgtcgatcccaaggtgcaggcgccgcaggct
ctctgtgtctgccctactcgggagttggctaatcagaacatcgaggttctccgcaagatg
gggaagtacaccgggattgcgtcggaatgcgctgtgccgacggatagcaatgcgctctcg
atcgcgaaaagggcgccgattatggcgcaggtggtgatcggaacccctggcaccatcaag
aagtggatgagcttcaagaaacttggggccgccaggttgaagattcttgtttttgacgag
gcagatcaaatgcttgcggaggatggatttaaagatgattccctgaggataatgaaagaa
atagaaaaagtcaattctaattgtcaggttcttctgttttctgctacatttaatgacacc
gtcaagaatttcgtttcaaggacagtcaaagaggatcataataaactttttgtaaagaaa
gaagaactatctttagatgcagtgaagcaatataaagtctactgttctgatgaacttgcg
aagattgaagtgataaaagattacatatttgaaataggagagaatgtggggcaaaccatc
atatttgtgcgtacaagaaatagtgcacaaatgttgcataaatcacttgttgacatgggc
tacgaggttacatctatacaaggtgctcttggtcatgacgagagagagaaaattgttaag
gagttcagagatggtttgactcaagttcttatttcaactgatcttctagctcgtggcttt
gatcagcaacaggttaatttggtcatcaattatgatcttccaatgaaacactgttctgag
cctgattgtgaagtgtatttgcatagggttggcagagctgggcgctttgggcgcaaaggg
gctgtatttaacctgatttgtgatcaaaaggatgaaaggctcatgtcgaagattgagaat
cacttcggcactcgtgtagctgaggtgcgagcacaaagtgttgaagactataaacgtgct
ctcaaggaagccggtttactgcaatga
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