Vigna angularis (adzuki bean): 108326692
Help
Entry
108326692 CDS
T04660
Name
(RefSeq) polyadenylate-binding protein 3
KO
K13126
polyadenylate-binding protein
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03015
mRNA surveillance pathway
var03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108326692
09123 Folding, sorting and degradation
03018 RNA degradation
108326692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108326692
03041 Spliceosome [BR:
var03041
]
108326692
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108326692
mRNA cycle factors
Stress granule specific factors
108326692
Spliceosome [BR:
var03041
]
Complex C
Other components
Complex C specific factors
108326692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_RdRP1_2
RRM_occluded
RBD_DEAH11
RRM_3
RRM_7
RBD_DGKtheta
DUF5062
SF-assemblin
Motif
Other DBs
NCBI-GeneID:
108326692
NCBI-ProteinID:
XP_017415796
UniProt:
A0A8T0KPV0
LinkDB
All DBs
Position
3:complement(7970178..7974341)
Genome browser
AA seq
637 aa
AA seq
DB search
MAAAVSSPMTQSVTATAAPVTALGGGPFSNASLYVGDLDGNVNEEQLYDLFSQVAQIVSI
RVCRDQSKRSSLGYAYVNFSNAQDATNAMELLNFTPVNGKPIRIMFSQRDPSIRKSGQGN
VFIKNLDTSIDNKALHDTFAAFGTVLSCKVATDNNTGLPKGYGFVQFDNEDSAQNAIKQL
NGMLINDKQVYVGLFIRRQARTNGSPKFTNVYVKNFSEAFTDEDLSKLFGSYGTITSATI
MKDMNGKSRCFGFVNFQNPDSAATAVERLNGTAIDDKVLYVGRAQKKAEREAELKAKIEQ
ERISRYEKLQGANLYLKNLDDNFSNEKLKDLFSEFGTITSCKVTVDSNGHSKGSGFVAFS
TPEEASKALNEMNGKLIGRKPLYVAVAQRKEERKAHLQAHFAQIRTSGGMTPLPAGIPVY
HHPGAPRLAPQQLYFGQGNPGFMPPQPAGYSFQQQILPGMRPGFAPNFITPYPLQRQAQS
GHRTGVRRNGNLQPMQQSQMMIHRNSNQGFRYLPNGRNGPTMPMHFDGSGINAAPNDGQR
SGALSTTLASALASATPENQRMMLGEHLYPLVERLTLNQYTAKVTGMLLEMDQSEVINLI
ESPEDLKTKVSEAMQVLYEATPESGVADQIGSLSVNE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcggtttcttcaccgatgactcaatctgtgactgcaacagcggctcccgta
actgcattgggcggaggaccattttcaaatgcctcgctgtatgtgggcgatctcgacgga
aatgtaaacgaggagcaactttatgatcttttcagtcaagttgctcagattgtttcaatt
agggtttgcagggatcagagcaagcgatcctctcttggttacgcttatgtcaatttttct
aacgctcaggacgcaaccaatgctatggaacttctaaacttcactcctgtcaatggaaaa
ccaattcgaattatgttttctcaacgtgatccaagcattcggaaaagtggacaaggcaac
gtgttcatcaagaacctggatacatcaattgataacaaagcattgcatgacacttttgct
gcttttggcactgtactttcttgtaaggtggctactgataacaatactggtctgccaaaa
gggtatggttttgttcagtttgataatgaagattctgcccagaatgcaatcaaacagttg
aatggcatgttgatcaatgacaagcaagtttacgttggactctttatccggcgtcaggct
cggacaaatggatcacctaaatttactaatgtgtatgtgaaaaatttttctgaagcattc
acagacgaggatctcagtaagttgtttggctcttacggtaccataactagtgcaactatc
atgaaagatatgaatgggaaatctagatgttttggttttgtaaattttcaaaatccagat
tcagccgcaactgcagtggaaagactaaatggtaccgccattgatgataaggttttatat
gtggggagggctcagaagaaagcagaaagagaggctgaattgaaagccaaaattgagcag
gaaagaataagtagatatgaaaaattacaaggtgctaatttgtatttgaaaaatcttgat
gacaacttcagtaatgaaaaattgaaagatcttttttctgagtttgggactataacatct
tgcaaggtgactgtcgactcaaatggacatagcaagggatctggttttgtggctttttct
acaccagaggaagcaagtaaagctttgaatgaaatgaatggcaagttgattggacgaaag
cctctttacgttgctgtggcccagcgcaaagaagagaggaaagctcatttacaggctcat
tttgctcaaatccgaacatcgggtggaatgacacctctgcctgctggcattcctgtttat
catcatccaggggcaccaagacttgctcctcaacaattatattttggtcaaggcaaccct
ggcttcatgcccccacagcctgctggatattcattccagcagcaaattttgcctggaatg
aggcctgggtttgcccccaatttcattactccttatccccttcaaaggcaggctcagtct
ggacacaggactggagttcgacgaaatggaaatcttcaaccaatgcaacagagccagatg
atgatacatcgtaattccaaccaagggtttcgatacttgcctaatggtcgaaatggtcca
actatgcccatgcactttgatggttctggaattaatgcagcacctaatgatggtcagcgt
tctggagcattgtctactacacttgcatcggctcttgcgtctgccactccagaaaatcag
cgcatgatgttgggtgaacatctgtatcctcttgtggagcgtctcacattaaaccaatac
acagcaaaggtgactgggatgctactggaaatggaccagtccgaagtaattaatctcatc
gaatctcctgaggacctgaagacaaaggtgtctgaggctatgcaggtattatatgaggct
acacctgaatctggagttgctgatcagattggatcgttatccgtaaatgaatga
DBGET
integrated database retrieval system
