Vigna angularis (adzuki bean): 108326794
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Entry
108326794 CDS
T04660
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108326794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108326794
03036 Chromosome and associated proteins [BR:
var03036
]
108326794
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108326794
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108326794
PBAF complex
108326794
GBAF(ncBAF) complex
108326794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
108326794
NCBI-ProteinID:
XP_017415847
UniProt:
A0A0L9U6K7
LinkDB
All DBs
Position
3:complement(26328201..26330665)
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AA seq
471 aa
AA seq
DB search
MSMNNNYNSIKPLGASSSGYPHPQIASGQYPLSQAHAIVQAQFQAQLQAHGLSFTPNAKR
FPPKPPVHTTTPLKQTEPVPGPRRKKPKQNEKQLPEKASAILPQSVLYTQLLDVEARVDA
ALARKKVDIQEAMRNPPCIQKTLRIFVFNTFSNQNVDSSAPTWTLKIVGRILEDGEEAEQ
PGVVAHRMPPLYPKFSAFFKRVTISLDKRLYPDNNVITWENSRSSATHEGFEVKRKGDKE
FSAQIRLEMNYVPEKFMLSPMLREVLGIQVDTRARIVSAIWHYVKARKLQNQNDPSYFHC
DQALQKVFGEDKVRFSMVSQKISQHLFPPQVILLEHMIKLSGNSPVGSACYDVMVDVPFP
IQRELNALVANVERNKEIDACDESICGIIRKIHEHRRRRAFYVGFSQSPLEFIKALVESQ
NKDLKVLLGESGHNAEMERKSDFFKQPWVEDAIVRYLNRKPAAGSNVPGST
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaacaacaactacaattctatcaagccccttggggcttcttcctccggctac
ccacatcctcaaatcgcgtcgggccagtaccctctgtcccaggcccacgccatcgtccaa
gcccagttccaggcccagctccaagcccacgggctttccttcacccctaatgccaaacgt
ttccctccaaaaccccctgttcataccaccacgccgctcaaacaaacggaacccgtgccc
gggcctcggaggaagaagcccaagcaaaatgagaaacagcttccggagaaagcctccgca
attctcccacagtcggtactctacacgcagctcctcgacgtagaggcgcgtgtggacgct
gcacttgctagaaagaaggttgacattcaagaagcaatgagaaacccaccctgcatccag
aaaacccttcgaattttcgtgttcaacacgttttcaaaccagaatgtggattcttccgca
cccacatggactcttaagattgttggaaggattttggaagatggtgaagaagctgaacaa
cctggagttgttgctcacaggatgccacctttgtacccgaaattttctgcctttttcaaa
agggtaactatttccctcgacaagaggctgtatccggataacaatgtcatcacatgggag
aattcgcggtcatctgctactcatgaaggttttgaggtgaagaggaaaggggataaggag
ttctcggcgcagattcggttggagatgaattacgtgccggagaagtttatgctgtcgccg
atgttgagggaagtgcttggtattcaggttgacacgcgggcaaggattgtttcagcgata
tggcattatgtgaaggcgaggaagttgcagaaccagaatgatccttcgtactttcactgt
gatcaggctcttcagaaggtgtttggggaggataaggtgaggttctcgatggtttcgcag
aagatatcacagcatttgtttcctcctcaggttattcttttggaacatatgatcaagctc
tcggggaatagtccggtcgggtctgcttgttatgatgtgatggttgatgttccttttccc
attcagagggaattgaatgctctggtggccaatgtggagaggaacaaagagattgatgcc
tgtgatgaatccatatgcgggatcattagaaaaatacacgagcaccgcaggaggcgagcg
ttctatgttggttttagtcaatctcctctggaatttattaaggccttggttgaatctcaa
aacaaggatctcaaagttttactcggagaatctggtcacaacgctgaaatggagcgtaaa
tcagatttctttaagcaaccgtgggttgaggatgctattgttcgttatttgaatcgcaaa
ccagcagcaggaagcaatgtcccggggagcacatga
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