Vigna angularis (adzuki bean): 108326816
Help
Entry
108326816 CDS
T04660
Name
(RefSeq) uncharacterized protein LOC108326816
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
var04131
]
108326816
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
var04812
]
108326816
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
108326816
Membrane trafficking [BR:
var04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108326816
Cytoskeleton proteins [BR:
var04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
108326816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
AAA_22
NPHP3_N
Vps4_C
AAA_14
AAA_16
Mg_chelatase
DUF815
AAA_25
AAA_2
FliT
TIP49
TniB
nSTAND3
IstB_IS21
RNA_helicase
MIT
AAA_24
nSTAND_NTPase5
NACHT
Motif
Other DBs
NCBI-GeneID:
108326816
NCBI-ProteinID:
XP_052729570
LinkDB
All DBs
Position
2:10043026..10048525
Genome browser
AA seq
479 aa
AA seq
DB search
MSFFQGIIDSLNSIFVPDNNHNTANSSSSSSSSSKDPMEAPPPSVSNERVAYKLKGYFDL
ATQEIAKAVRAEEWGLADDALLHYRNAQSILVEANSTPVPSYITSSEQQKVQSYREKISK
WQSQVSERLQTLSRRAGSSSANQSTAAIPIKPLGTRKNVLQKPPQRIGQVNKVGSPKSSQ
ASGVNYDTKLVEMINTAIVDRSPSVRWEDVAGLEKAKQSLMEMVILPTKRRDLFTGLRRP
ARGLLLFGPPGNGKTMLAKAVASESQATFFNVTAASLTSKWVGEGEKLVRTLFMVAISRQ
PSVIFIDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTSNPDDIVIVIGATNKPQELDD
AVLRRLVKRIYVPLPDENVRKLLLKHKLKGQAFSLPSRDLEKLVKETEGYSGSDLQALCE
EAAMMPIRELGADILTVKANQVRGLRYKDFKKAMAVIRPSLIKSKWEELERWNKEFGSN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctttcagggaattattgattccttaaactccatcttcgtcccagataacaat
cacaacaccgcaaattcttcttcttcttcttcttcttcttcaaaggatccaatggaagct
cctcctccttccgtttcgaacgagcgcgtggcttacaagctgaaaggctacttcgatttg
gcgacgcaggagatcgcgaaggccgttagggctgaggaatggggtttggcagacgacgcg
cttcttcactacaggaacgcgcaatcgatccttgtcgaagctaattcaactccagttcct
tcctacatcacctccagtgagcagcagaaggtgcagtcatatcgtgagaagatatccaaa
tggcagagtcaagtttctgagagattgcaaactctctctagacgagctggtagctcatca
gccaatcagagcaccgctgcaataccgatcaagccattgggtactagaaaaaatgtgtta
caaaagcctcctcaaagaataggtcaggtgaataaagttggaagcccaaaatcgagtcaa
gcatctggtgtaaattatgataccaaactagttgaaatgattaacactgccatagtagat
agaagtccatctgttagatgggaagatgttgccgggctcgaaaaggcaaagcaatcttta
atggagatggttattttgccaactaagagaagagacttgtttactggtcttcgaaggcca
gccagaggtttgcttctctttggtccacctggtaatggaaaaaccatgcttgccaaagca
gtggcgtcagaatcacaagcaacattttttaatgtcacggcagcttccttgacatcaaaa
tgggtgggtgaaggtgaaaagcttgtccggacactattcatggtagctatatcaagacag
ccatcagtaattttcattgatgagattgatagtataatgtcaacaaggttggccaatgag
aatgatgccagcagacgattaaaatctgaatttcttatccagtttgatggggtgacctcc
aatcctgatgatattgtgattgtaattggtgcgacaaataagccacaagaattggatgat
gcagttcttaggagactggtaaagagaatatacgtacctttaccagatgaaaatgttcga
aagcttctgttaaaacacaagctcaagggtcaagcattctccttacctagtagagatcta
gagaagcttgtaaaagagacagaaggatattctggtagtgatctgcaagccttgtgtgaa
gaagctgcaatgatgccaattagagagttgggtgctgacattcttactgttaaggctaat
caggtaagaggactaaggtacaaggattttaagaaggcaatggctgtaattagaccgagc
ttaatcaaaagtaagtgggaagagcttgagcgctggaataaggaatttggctctaattga
DBGET
integrated database retrieval system
