KEGG   Vigna angularis (adzuki bean): 108326847
Entry
108326847         CDS       T04660                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
var  Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:var00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:var03009]
    108326847
Ribosome biogenesis [BR:var03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    108326847
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_EML Beta-prop_TEP1_C NBCH_WD40 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_IP5PC_F Beta-prop_Vps41 Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_LRRK2 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_IFT122_1st WDR54 Beta-prop_WDR19_2nd Nucleoporin_N Ge1_WD40 Beta-prop_NUP159_NUP214 GCN5L1 LZ3wCH
Other DBs
NCBI-GeneID: 108326847
NCBI-ProteinID: XP_017415917
UniProt: A0A0L9U1U9
LinkDB
Position
2:complement(2679165..2689862)
AA seq 448 aa
MEVVLASSSLDGGIGCWDLHTGAEQLRYKSCSSPSHGLVAVGPRFIASSQLREPSATSGS
VLFWSWSKPQVEVKSFPAEPIKPLASNHLGTFIAGGALSGDIYLWEVETGRLLKKWHAHL
GAVTCLVFSEDDSLLVSGCGDGTVRVWSLFMIFDEFRCQLANNLYEYSFSGHTLCVTDVV
IGNGGCNAIIVSASEDKTCKVWSLSRGTLLRNIVFPSHIDSIALDPAEHVFYAGSRDGKI
FIAALSTESVASNNCGMHIIGSFSNQSKRVTCLAYSMSENLLISGSEDGMVRVWDARTRT
NVRVFKHAKGPVNNILVVRRENSSNHISSNVQTSSRKQGANLPPPLEKYANSIHEDSDMN
TTISLGGDRSSGDPSYLSSHVISNYVKELQHQGSAAASEMETEKLKHDYQRAMQMANQWK
KMYENLNKFCVKELLDGSQARTLDENHN
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggaggttgttttggcgtcgtcgtctctagacggcggaatagggtgctgggatcttcac
accggcgcggagcagctccgctataaatcttgctcctccccttctcacggccttgtcgcc
gttggtcctcgcttcatcgcctcctctcagcttcgagaaccttcagcaacatctggttct
gttctcttctggtcctggtccaagcctcaagttgaagtgaagagctttcccgctgaacct
attaagccccttgcttcaaatcacctgggaaccttcattgctggtggagctttgtctggg
gatatttacttgtgggaagttgaaaccggtagattgcttaagaagtggcatgcacattta
ggggcggttacttgtctggttttttctgaagatgactcgctgttggtatctggttgtgga
gatggaaccgtaagagtttggtctctcttcatgatattcgatgaattcagatgtcagctg
gctaataatctttatgagtatagtttttccgggcacaccctgtgcgtgactgatgttgtg
attggtaatggagggtgcaatgcaattattgtgtcagcttctgaggataaaacttgcaag
gtatggagcttatctaggggaacactactaagaaatatagtattcccttcacatattgat
tccattgcattggatccagctgaacatgtcttttatgctggcagtagagatggaaagata
tttattgcggcacttagcactgaaagcgttgctagtaataattgtgggatgcatatcatt
ggttctttttctaaccagagcaagagagttacttgcttagcatatagcatgagtgagaat
ttgttaatatccgggtcagaggatggaatggttcgtgtttgggatgcaagaactcgaacc
aatgtccgagtgttcaaacatgctaaagggcctgtaaataatattcttgttgttagacga
gaaaactcaagtaatcacatatcttctaatgtacaaacatcatcaagaaagcaaggggct
aatttaccccctccattggaaaaatatgcaaattccatacatgaagactcagatatgaac
actacgatcagtcttgggggtgacaggagttccggagatccttcatacctcagttctcat
gtgatatctaattacgttaaggaacttcagcatcaaggatcagctgctgcttctgaaatg
gagacggagaaactaaaacatgattaccaaagggcaatgcaaatggctaaccaatggaag
aaaatgtatgaaaacttaaataaattttgtgtgaaagaactgttggatggtagtcaagcc
agaaccttagatgaaaatcacaattaa

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