Vigna angularis (adzuki bean): 108326904
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Entry
108326904 CDS
T04660
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108326904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108326904
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108326904
mRNA degradation factors
5'-3' decay
Decapping complex
108326904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
108326904
NCBI-ProteinID:
XP_017415996
UniProt:
A0A0L9U8M3
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Position
2:45887691..45891523
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AA seq
355 aa
AA seq
DB search
MSQTKKLTPNLDQQSTKVLNLTVLQRIDPFIDEILFTAAHVSFYDFNIETNQWSRKDVEG
SLFVVKRNSQPRFQFIVMNRRSTDNLVENLLDFEYELKSPYLLYRNAAQEVNGIWFYNPD
ECEEVANLFNRILNLYPKAPPTTTTPANRSEFEEHQPVSVISGSPLESSSAAASAIDAVE
DAVFSNFCSTLKATRNYASVIRNDRQHSTSSAPSSLFSPAPTVQIPASHSTSSISGLPVD
SLETVKNGNQAINLVKPSTFFTSTSSSLLVPPISSSVLPSSVGNHSLKMPRPYGTPVLQP
FPPPIPPLSLTPISSSSPNRPVIGRDSVRSALLSLVQDDQFIDMMFQALLKVSPS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaccaagaaattgacgccgaatctggatcagcagagcacgaaggtgctgaat
ctaacggtgctccagcgaatcgatccattcatcgacgagattctcttcaccgccgctcat
gtctccttctacgacttcaacatcgaaaccaaccagtggagtcgcaaggatgtcgaagga
tctctcttcgttgtcaagaggaattcacagccacggtttcagtttatcgtaatgaatcga
cgaagtacagataaccttgtggagaatctattggattttgagtatgaacttaaaagcccg
tacctattatatcggaatgctgctcaagaagttaatggtatatggttttataatccagac
gaatgcgaggaagttgcaaatctttttaacaggatacttaatttgtacccaaaggcacct
ccaactaccacaacgcctgctaacagaagtgagtttgaggaacatcagccagtgtcagtg
atatcaggaagccctctagaatcgtcttcagctgctgcttctgcaattgatgctgttgaa
gatgctgtattttcaaacttttgcagcacattgaaggctactagaaattatgcttccgtt
atcagaaatgatagacagcattctacttcttctgctcctagtagtttattttctcctgca
cctactgtgcaaatacctgcttctcattcaacttcatctatatcaggcttacctgttgac
tctcttgaaacagtcaagaatggcaatcaagccattaatctcgttaagccttctactttt
ttcacatccacttcatcatcactgttagttccacctatttcttcatctgtgctgcctagt
tcagttggtaatcattccctgaaaatgccacgaccatatggcacaccagtacttcaaccc
ttcccgccccctattcctcctctctctcttacccccatttcaagctccagtccaaataga
cctgtaattggaagggatagcgttcgcagtgcacttttatcattggttcaggatgatcaa
ttcattgacatgatgttccaggcattactgaaggtgagtccttcatga
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