Vigna angularis (adzuki bean): 108326976
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Entry
108326976 CDS
T04660
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108326976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108326976
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108326976
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
108326976
NCBI-ProteinID:
XP_017416103
UniProt:
A0A0L9U655
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Position
2:complement(27416087..27420456)
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AA seq
1164 aa
AA seq
DB search
MYQAVARRTRSKKPWVVGGGLTMGRKRRKVDEEDDDEVICLGENLEGEGAAREKFASASG
ASCSSPDDMKNGFAYLGETEDDPDPDPEEVVDLEGHDGAEVRIDECYETKGFQVKEEERD
EEGEGCSVAAVRADKGESFDDDEYGTKPEKPVVLLPDSCRGGRSSSDDGYDSLWSSTESE
DVETSDDDFKVDEDDDDDDDVESEYSSSEESYSSEDDERRGYKMFKERVRKVVSESESSR
VWRRKGERKNKHVEKELVEKWNGGDCASVASSKSEINKEETKRAQENKQRANRVENVNNA
DPEVLSDQGKSSGLYVSSDDDALEDKEKGVRDHQRVFFQKETRDSNVINKCGKNNKVKAN
AKETGHKDELHEMLRMSSTSKNHCFEFFNECFRGKRDSKDVSRDLDKKVGVDEGQTPPFG
SRETISLNWNSMMKEKPVEKSESQQELDMLWEEMEMLLQAEKIGVQSDNIEINEPREIEE
NPVIRCKHDTIFDEQIGIHCRWCGWIETEIKYITPPFIDSERYGRRVSSGGGNSSRLDGV
LFSECGEDSEAVRSHNHGTVWDLTPGIKESLFPHQQEGFEFIWANLAGTIELSKLKMVDP
QSEGGCIVSHAPGTGKTRLTMVFLQTYLQVFPKCLPIIIAPANILLTWEDELRKWNIGIP
FHNLNNAELSGKEHAIREVDWLFNQQQKKDVIRMVKLCSWYKEKSILLISYNLYEKLAGG
KSEGDGEKEKNNRKNGKQKKNRKIGKEKKRVETELGNVLRDYPDLLVLDEGHTPRNKRSC
IWKVLSESRSQKRILLSGTPFQNNFLELYNILCLMKPSFPDSIPQELKKFLKNKLIQETK
ASKDESWEPISAGNQADEKINQLKLLMNPFVHVHKGSILQKNLPGLRDCVLVLKPECLQK
DILESIDCSQNALNFEHKLALVSVHPSLFLNCALSKKEESVIDSELLKRIRLDSYQGVKT
KFLLEFVRLCDAVNEKVLVFSQFIDTLCLIRDQLESAFNWSVGTDVLYMHGKLDQKQKQF
LIHNFNDANSQAKVLLASIKASSEGINLVGASRVVLVDVVWNPSVERQAICRAYRLGQKR
VVYTYHLLAQGTPECAKYDKQSEKDRLSELVFSSRNVENDKLENVGVKFEDKVLDLMVQH
NSLKDIFGQCLVQPKDRDLETLGP
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaggctgttgctcgcaggactcgaagcaagaaaccttgggtggtcggtggtggt
ttgacaatgggtcggaaaagaagaaaggtggatgaagaagatgatgatgaagtgatttgc
ttgggagaaaatttggaaggggaaggggctgcaagagagaaatttgcatctgcgtctggg
gcttcatgttcatcaccagatgatatgaagaatggtttcgcgtatttgggagagactgag
gatgatcctgatcctgatcctgaagaggtggttgacctcgaaggccatgatggagctgaa
gtgaggattgatgagtgttacgaaaccaagggttttcaggttaaggaggaagagagggat
gaggagggtgaaggctgttctgtagcagctgtgagagctgataaaggtgagagctttgat
gatgatgaatacggtactaaacctgaaaagccggttgttttgttgcccgattcatgtagg
ggtggacgtagtagctctgatgatggatatgattcgttgtggtcttcaacggagagtgag
gatgttgagactagtgacgatgattttaaggttgatgaggatgatgacgatgatgatgat
gttgagagtgaatactcaagcagtgaggagagttattcttctgaagatgatgagaggagg
ggatacaagatgtttaaggaaagagtaagaaaggtggtgagtgaatctgagagcagtaga
gtttggagaaggaaaggtgaaagaaagaataagcatgtagagaaggagttggtggagaaa
tggaatggtggtgattgtgctagcgtggcatctagtaaatcagagatcaataaggaggaa
acaaaaagggcacaagagaataaacaaagagcaaacagagtagagaatgtcaataatgct
gatcctgaagttttgagtgatcaggggaaaagttcaggtctctatgtgtcttctgatgat
gatgcgctagaggataaggagaaaggagtgagggatcatcaaagggtgttttttcaaaaa
gagacaagagattcaaatgtgatcaataagtgtgggaaaaataataaggtcaaggccaat
gctaaagaaactggacataaagatgagctgcatgaaatgctgaggatgtcatcgacatca
aagaaccactgttttgaattcttcaatgaatgctttaggggcaagcgtgattctaaagat
gtttcaagagatttggataagaaggttggtgttgatgagggtcagactccgccatttggt
tcaagggagacaatttctttaaactggaactccatgatgaaagaaaaacctgttgagaaa
tctgagtcacagcaagagttggatatgctgtgggaagaaatggagatgttgcttcaagct
gaaaaaattggagtccagagtgataatatagagataaatgaaccaagagaaatcgaagaa
aatccagtcattcgatgcaaacatgacaccatttttgatgagcagatagggattcactgt
agatggtgtggttggattgaaaccgaaattaaatatatcacaccgccatttatagattct
gagagatatggcagaagggtgtcgtctggtggagggaacagctcgcgacttgatggggtt
ctcttcagtgaatgtggtgaagactcggaagcagttaggtctcacaatcatggcacagtt
tgggaccttactccaggcataaaagaaagcttgtttcctcaccaacaagagggatttgag
tttatttgggcaaatttggcaggaaccattgaactttcaaagttgaagatggttgatcct
cagagtgagggtgggtgcatagtttctcatgctcctggaactggaaagacgaggttgacc
atggtgtttctgcagacatatttgcaggtgtttcctaagtgtttacccattatcattgct
cctgccaacatattactcacttgggaagatgagctgaggaagtggaacataggaattcca
ttccacaatttgaacaatgctgaattatcagggaaggaacatgccattagggaagttgat
tggttattcaaccaacagcaaaaaaaggatgtcataagaatggtgaagttgtgttcttgg
tacaaagagaagagcattctgttaatcagctacaatctttatgaaaagctagccggggga
aagtctgaaggagatggggagaaagagaagaacaatagaaagaatggaaaacagaagaaa
aatagaaagatcggaaaagagaagaaacgtgttgaaactgaattgggaaatgttctgaga
gactatcctgatttattagttcttgatgaaggccacacaccaaggaacaagcgaagctgt
atttggaaggttctctcagagagtagaagtcagaagcggatccttctttcagggactcct
ttccagaacaattttcttgaactctacaatattttgtgcttaatgaaaccatcttttcct
gacagcataccgcaggaactcaagaagttcttgaaaaacaaactgatacaggaaacgaaa
gcttcaaaagacgagagttgggaacccatttctgctggaaatcaagccgatgaaaagata
aaccagctaaagctgctgatgaatccctttgttcatgttcacaaaggtagtattcttcag
aagaatcttcctggtttaagagactgtgtgctggttttgaagccagaatgcttgcagaaa
gacattctggagagcattgattgttctcaaaatgcacttaacttcgagcacaagttggcc
ttggtctctgttcatccctcccttttcctaaactgtgctctgtcaaagaaagaagaatct
gttattgattcggagctgttgaaaaggattagattggactcttatcaaggggtcaaaacc
aaatttctgcttgagtttgtgagactatgtgatgcagttaatgagaaagtccttgtgttc
agccagttcattgataccttatgcttgatcagggaccagctggagtcagccttcaactgg
agtgtgggaacggacgtgttgtatatgcatggaaagctggatcaaaagcaaaagcaattt
ctcattcacaatttcaatgatgcaaatagccaggcaaaggtgttgctagcttctataaaa
gcatcttctgaaggcattaacctggttggagcttcaagggtcgtgcttgttgatgttgtt
tggaatccctcagtggaaaggcaagctatttgtagagcatatagacttggacagaagagg
gttgtttatacttatcatcttcttgcacagggcacccctgaatgtgcaaaatatgataaa
cagtcagagaaggaccgcttatctgaactggtattctcaagtaggaatgttgaaaatgat
aagcttgaaaatgttggagtgaagtttgaggataaagttcttgatctcatggttcagcat
aacagtctcaaggacatatttggtcaatgtctggttcaaccaaaggacagagatttggaa
actttgggcccttaa
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