Vigna angularis (adzuki bean): 108327083
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Entry
108327083 CDS
T04660
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
var03036
]
108327083
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108327083
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Meiosis-specific proteins
Others
108327083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_C
ResIII
HHH_5
Cdd1
AAA_22
IMS_HHH_1
DNA_pol_lambd_f
HHH
DUF7898
Motif
Other DBs
NCBI-GeneID:
108327083
NCBI-ProteinID:
XP_017416284
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All DBs
Position
2:29784122..29796489
Genome browser
AA seq
1145 aa
AA seq
DB search
MDSYSLKSAFDLPPPFRSCFSFRYFNSLQSECFPICFHSDVNMVISAPTGSGKTVLFELC
ILRLLSRFISAGGIFIHEKGSLKTIYIAPSKALVQEKLRDWNKKFGPLGINCLELTGDSE
SYTPRNILEADIILTTPEKFDAVSRYGIESGGLSFFSDIALLLIDEVHLLNDPRGAALEA
IVSRIKIVSGNPKLKSNPLAQVRFLAVSATIPNIEDLAKWLEVPDQGIKRFGEEMRPVKL
TTKVFGYARAKNDFLFEKRLQNYIFDILMQYSRGKSALVFCSTRKGAQEAAQRLSQIVMT
FGQSNPFIKNREQQDRLREASLSCSDKHMQSYILYGVGYHNGGLCLKDRNIVEGLFLKGD
IQVLCTTNTLAHGINLPAHTVVIKSTQHFNKEKCLYMEYDRSTILQMCGRAGRPPFDDTG
MVIIMTRRETVHLYENLLNGCEVVESQLLSCLTEHLLAEIVQLTVSDITKAIEWLKFSYL
YVRMKTNPMNYAIKKGISGDSLEKHVQDICVHKVKELSQCQMVWVDEDGFLLRPLDPGRL
MTKYYLRFDTMKQIMRTPESCSLEDALHVVCSAEEIAWIQLRRNEKKLLNDINADKDGRL
RFHILGDKGRKKKRIQTREEKIFILANDCLTGDPSVHDLSLIQDMNSICSNGFRIAKCMK
EYFVYKRNYKGAVNSALLAKSLDQKLWDDSPYLLKQLPGIGMVTAKALHSMGVKSFEALA
EADPRRIELVTGRKYPFGNHIKDSLLSLPPKVDVKLAEIENHIEGKSKIVVTLTRKAESG
QSVKGHYADMIIGSEDNTILFHEKIRVDQFPSPYCATILVPIPQEKQTIKADFIFEEYIG
IDVHQKLSLMRESNSIVLLKRNRKQASCPPTEEIYVIEDDNINVPHLPTKELCTLSVDKD
SIPSFDLLDESLDEVEDGHSLEVEEEKCKMITEKTVFDHIRQKAKCFSLLSAFDNIRCPS
LEVFLSKDNARLKRRNHHHEIVVLDDEDGLEVPQPNGVNLPVELKNAEQDGIRPYLTLND
HHIAGSSNIVDTELFSKNNLSSLSAAFGVARETNSLDIDNENMLTSYVKTAAEVCASSIQ
EKKRLLEDSGPGSFAVSKKHRCTSREFIEEQSSPSEIRRQCCSIETTGQNEIESYLGFKS
VFSFL
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggattcatattctttgaagtctgcgttcgatttgcctccgccttttcgttcatgtttt
agtttcagatattttaattcacttcagagtgaatgctttcctatctgttttcactctgat
gtaaacatggtcatctctgcaccaactgggagcggtaaaactgtactctttgagctttgt
attttgaggctactttccaggttcatatctgccgggggaatattcatacatgaaaaggga
tctcttaaaacaatctatatagccccatccaaggctttagtacaggagaagctccgtgat
tggaataaaaagtttgggccattaggaataaattgcctggagctgacaggtgacagtgaa
tcttacactccaaggaatatactagaagctgatattattctcacaactcctgagaaattt
gatgcagtgtcacgttacggtatagaaagtggtggcttgagctttttcagtgacattgca
cttttactaatcgacgaagttcatctattgaatgatccacgtggagctgcccttgaagca
attgttagtagaataaaaatcgtttctggcaatccaaaattgaaatcaaatcctctggct
caggtccgcttcctagctgtgtctgccacaattccaaatattgaggatctagcaaagtgg
cttgaggttcctgaccaagggatcaaaaggtttggagaagaaatgaggcccgtaaagctg
acaaccaaggtttttggctatgcccgtgccaagaatgacttcctctttgagaagcgcctt
caaaattatattttcgatattctcatgcaatactcgagagggaaatctgctcttgtattt
tgttcaacaagaaaaggagcacaagaagctgctcagcgactatctcaaatagtaatgact
tttggtcaatcaaatccattcattaagaacagagagcaacaagatcggctgagggaggct
tctctgtcatgcagtgacaagcacatgcagtcatacattctttacggtgttggttatcac
aacggtgggctttgcctcaaagatcgcaatattgtagaaggcctttttctcaagggagat
attcaagtactttgcacaacaaatacgctagcccatggaatcaatctcccagcacatacc
gtggttattaaatcaacacagcacttcaacaaggaaaaatgtctctatatggaatatgat
cgctccactatattgcagatgtgtggaagggcaggccgacccccatttgatgatacgggc
atggttataatcatgacaaggagagaaacggttcatttgtacgagaatctcttaaatggg
tgcgaagtggtagaatcacaattgctctcgtgtttgacggagcatttacttgcggaaata
gttcaactgacagtatctgatattacaaaagcaattgaatggcttaaattctcctacttg
tatgttagaatgaaaacgaatcctatgaactatgcaattaagaaaggcatttctggtgat
agtttagagaaacatgtacaagatatatgcgtgcataaagttaaagagttatcccaatgt
caaatggtctgggttgatgaagacggtttcctcttgcgaccattagatcctggaaggtta
atgacaaagtactatttgagatttgacactatgaaacagataatgcggactcctgaaagt
tgcagtttggaagatgcacttcatgttgtgtgcagtgcagaagaaattgcatggatacag
cttagacgcaatgagaagaagctcttaaatgatatcaatgctgataaagatggacggctt
cgctttcacattcttggagataaagggagaaagaaaaagcgcattcaaacaagagaagaa
aagatatttattttagcaaatgactgcttaactggtgatccatcagttcatgacctatct
ttgattcaggacatgaattctatatgctcaaatggatttagaatagcaaaatgcatgaaa
gagtactttgtttacaaacggaattacaaaggagctgtgaattcagcacttctagccaaa
tcactcgaccagaaactttgggatgacagtccataccttctgaaacagttacctggaatt
gggatggtcacagcaaaggcactgcattcaatgggagtcaaatcgtttgaggcacttgct
gaagctgatcctaggagaatagagctagtgactggtcgaaaatacccatttggtaaccat
attaaagattctctactatctctgcctccgaaagttgatgtgaagcttgcagaaattgaa
aaccatatagaaggaaagtccaagatagtagtgacgttgactaggaaagcagagtcaggc
cagtcagttaaaggacattatgctgatatgatcattggttcagaggacaatactattctg
tttcatgaaaagataagggttgaccagttccccagcccatactgtgcaacaattcttgtg
cccattccacaagagaagcaaactatcaaagctgattttatatttgaggaatacattggc
attgatgtccaccaaaagctttccttaatgagagagagcaattcaattgtgcttttgaaa
agaaacaggaagcaggcttcttgtcctccaacagaagagatatatgttatagaagatgac
aacataaatgtacctcatttaccaacgaaagaactgtgcaccctgagcgtggacaaggat
tccattccaagtttcgacctcttggatgaaagtttagatgaagtggaagatgggcattct
cttgaggtggaagaggagaaatgcaaaatgatcacagagaaaacagtttttgaccacatt
cgtcagaaagctaaatgcttttctctcctatctgcatttgataacattcgctgtccatca
ctggaggtctttctttcaaaagataatgcccgtttgaagaggcgtaatcatcatcatgag
atagttgtgctggatgatgaagacggacttgaagttcctcaaccaaatggtgtcaatttg
ccggttgagctcaaaaacgcagaacaggatggtatccgaccttatctgactttaaacgat
catcatatagctggaagttcaaatatagttgatacagagttattctcaaagaataatctc
agttccttgagcgctgcttttggtgtggcaagagagacaaattccttggacattgacaac
gagaatatgcttacttcatatgtgaaaactgctgctgaagtatgtgcatccagtatccag
gagaaaaagcggttgttagaggactcaggtcccggaagctttgcagttagtaagaagcat
cgttgcacttccagagaatttatagaagagcagtctagcccaagtgaaatacgaagacag
tgctgttctatagaaaccacgggccaaaacgaaatagagtcatatcttgggtttaaaagt
gtattttcctttctctaa
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