Vigna angularis (adzuki bean): 108328123
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Entry
108328123 CDS
T04660
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108328123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108328123
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108328123
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
108328123
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Imm58
Motif
Other DBs
NCBI-GeneID:
108328123
NCBI-ProteinID:
XP_017417422
UniProt:
A0A0L9U890
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Position
2:complement(40370087..40372138)
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AA seq
325 aa
AA seq
DB search
MRGIQLPLSQTQKVRLQKTLEQLESLSSKVNSDASVIIADSIPVNHEDGVLKGHGTADLN
GEVVATVCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVAEVAQKRWRLDINFNQDAVLM
LSSMNMPDGVQRRRTALDELNMRCIFEENDVVCAEVRGFQHDGLHLQARSRKYGKLNRGQ
LLTVPPYLVKRQKQHFHHLEEFGVDLILGCNGFIWVGEHIEAKDDMVEDQVSQSDPPVLL
HNSASLEEQEKNYTILEIRKYICRAANAVRVLSILGFNVTLEIIKGIIDLSLSMNLDIHE
MLGSEFCVLVAEKEAERRSSNKKKR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaatacagttaccgttaagccaaactcagaaggttcgtcttcagaagactctt
gaacagttagaatctctctcgtcgaaggtcaattccgatgcttccgtcatcatcgctgat
tccattcccgtcaaccacgaagacggagtcctcaagggacacggaaccgccgatctcaac
ggcgaagtcgttgccaccgtctgcggcgtcgttgagcgcgtgaacaaacttgtctacgtc
cgcgctttacgctccaggtataagccagaggttggtgacattgttataggacgtgttgct
gaggttgctcagaagcgctggagactggatataaatttcaatcaggatgcagttttgatg
ctttcttccatgaatatgcctgatggggtccagaggcggaggacagcgctggatgagcta
aacatgcgttgcatttttgaggagaatgatgttgtctgtgctgaagttcggggtttccag
catgacggcttacaccttcaagctaggagtcggaaatatggaaagcttaatagaggtcag
ctgcttacagtcccaccttatctagtgaagagacagaaacaacatttccatcatctggag
gagtttggcgtcgatttgatacttggctgtaacggattcatatgggttggggaacatatt
gaagccaaagatgacatggtagaagatcaggtgagccaatccgatccaccagttttactg
cataacagtgcaagtcttgaagaacaagaaaaaaattatacgatattggagatcagaaaa
tatatttgcagagcagctaatgctgttagagttctatcaatcttaggcttcaatgttaca
ttggaaataatcaagggaattattgatctaagcctatctatgaatcttgatatacatgag
atgcttggttctgaattctgtgttctggttgctgaaaaagaggcagaaaggaggagctca
aataaaaagaagcggtag
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