Vigna angularis (adzuki bean): 108328356
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Entry
108328356 CDS
T04660
Name
(RefSeq) WD repeat-containing protein LWD2
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108328356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108328356
03036 Chromosome and associated proteins [BR:
var03036
]
108328356
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108328356
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
108328356
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_EIPR1
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
MIOS_WD40
NBCH_WD40
WD40_RFWD3
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
108328356
NCBI-ProteinID:
XP_017417704
UniProt:
A0A0L9U8I3
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All DBs
Position
2:complement(45842276..45844693)
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AA seq
344 aa
AA seq
DB search
MDSVEVNFSIQSHTEAKQGVHTYAAQWPISSLAWSMRRDKSPRLAIGSYLEDYTNKVELV
HFNNDTFNFTTDPRLVFDHPYAPTNIMFFPSEDDTNPDLIATSGDNLRLWEIHEDHIQLK
SPLIGNKVSDHSAITSFDWAVFDTRLIATSSVDTTCTIWDIEREVMKAQLVAHDKEVYDI
SWGGFNVFASVSGDGSVRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKSDPRFMATVGLD
SNKVVILDIRLPTTPFMELSKHRTCVNAMSWSPDFGRHLCSVGDDARAFIWDVMDSRFPS
RNGCEVEPVMWYGSPAEINQVRWSPMQVDWIALAFFNNLQLLKV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggattccgttgaagtcaacttcagcattcaaagccacacagaggcaaaacaaggcgtt
cacacatatgctgctcagtggccaatttcctctctggcatggtcgatgcgtcgtgacaaa
agccctcgccttgccattggcagttacttggaagattacaccaacaaggtcgagcttgtc
cacttcaacaacgacaccttcaatttcaccaccgatcctcgtctggtgtttgaccaccct
tatgcacccacaaacatcatgttctttccctccgaggatgacaccaatccagacctcatt
gccacctcaggcgacaacctcagattgtgggaaatccacgaagaccacattcaactgaag
tccccgctaattggtaacaaagtcagcgatcactcggcaattacctcgtttgattgggca
gtgtttgacactcgtcttatagccacttctagtgtggacaccacatgcaccatctgggac
attgagagggaagtcatgaaggcacagctagtggcacacgacaaagaagtgtacgacatt
tcatggggtgggttcaatgtgtttgcttccgtgtcaggagatggttctgtgagggtgttt
gacttaagagacaaggagaaatctaccataatttatgaaaatcctgtgcaggattgtccc
ttactgcgattagaatggaacaaaagtgatccaagatttatggcgacagtgggattggac
agcaacaaggtggtgatattggatatcaggcttccgaccacaccgtttatggagttgagt
aaacatcgaacatgtgttaatgcgatgtcatggtccccagattttggacgacatttgtgt
tctgttggcgatgatgcaagggccttcatctgggacgttatggactcaaggtttccatca
aggaatggttgtgaagtggagccagtgatgtggtacggatctccggctgaaatcaatcag
gtccgttggtccccaatgcaggtcgattggattgcgcttgctttcttcaacaacttacaa
ctactcaaagtgtag
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