Vigna angularis (adzuki bean): 108328983
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Entry
108328983 CDS
T04660
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
var03009
]
108328983
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108328983
Ribosome biogenesis [BR:
var03009
]
Eukaryotic type
90S particles
Helicases
108328983
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108328983
NCBI-ProteinID:
XP_017418419
UniProt:
A0A0L9U850
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Position
2:complement(43736690..43742967)
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AA seq
535 aa
AA seq
DB search
MANDSSFLFSGIRFNRKKFGADIARFQKKDNDTDSAKIWSVVRDGSAKTREAVEEKTAST
KKRKRKGNSSENVEGFNVFRNSASVAQSSGEVQADQESIELSKKKNKKEQNRQFERDAIF
RKQHNIHVSGYNVPSPLQSFDELKSRYKCPSYLLRNLKELGFREPTPIQRQTIPVLLAGR
ECFACAPTGSGKTLAFVCPMLMKLKDPEKGGIRAVILCHTRELSAQIFRECKKLAKRKKF
GIKLMTKNLLRNADFSKFPCDILISTPLRLRLAIKKKKIDLSRVEYLVLDESDKLFEPEL
FKQIDSVLKACSNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASETIKQKLI
FTGSEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELEFDNIRVDVIHSDLSEQER
GNAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDSASAYVHRIGRSGRAGRSGE
AITLYTEEDIPLLRNVANLMAASGCEVPPWLMELQKKKWKKHRPKRDSISTKPDL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgactcttcgtttctgttttccggcattcgtttcaacagaaagaagttcggc
gccgatatcgccagattccagaaaaaagataacgatactgattcggcgaagatttggagc
gttgtcagagacggaagcgcaaaaacgagggaagcagtagaagagaaaacagcgtccacg
aagaagaggaagcgcaagggaaactcttctgaaaatgttgaaggattcaatgtatttaga
aattccgcatctgtggcgcagtccagtggcgaagttcaagctgatcaggagtctattgag
ttaagtaagaagaagaataagaaggaacaaaatcgacaattcgagcgggacgcaatattc
cgaaagcagcacaacattcatgtttccggttataatgtaccgtctcctcttcaaagcttt
gacgaattgaaatcaagatataagtgtccatcgtatttgttgcgcaacctgaaggagctt
ggattcagagaaccaacgcctattcaaaggcagactattccagtacttttagctggtcgt
gaatgctttgcgtgtgcaccaactggttctgggaaaacccttgcatttgtatgtccaatg
cttatgaagcttaaggacccagaaaagggtggcattcgagctgttatcctttgtcatacc
cgtgaattatctgctcaaatatttcgagagtgcaaaaaacttgccaaaagaaaaaaattt
ggaattaagttaatgactaaaaatctcttaagaaatgctgatttttcaaagtttccatgt
gatatactaatatccacaccactgcgattgcggttggctatcaagaagaagaagattgat
ctcagcagagtggagtatcttgtcctggatgaatcggataagctgtttgaacccgaatta
ttcaagcagattgattctgttctcaaggcatgctccaacccctcaatcattcgctcgctt
tttagtgctactttacctgattttgttgaagatcgagctcgagaacttatgcatgatgct
gttcgtgtaattgttggcagaaagaatatggcttctgaaacgataaagcaaaaattgatt
tttactggaagtgaagaaggaaaacttcttgcaattcgtcaaagttttgcagagagtcta
aatcctccagtattggtctttctccaaagcaaggaacgagccaaggagttgtacggtgaa
cttgaatttgacaacattagagttgatgtcattcattctgatttgtctgaacaagagcga
ggaaatgctgtcgacaacttcagagctggaaaaacatgggttttgattgctactgatgtg
gttgcccggggcatggatttcaaaggagtgaactgtgtgatcaattatgatttccctgat
tctgcctccgcatacgtccacagaattggtcgttctggcagagcaggaaggagtggagaa
gctattacgttgtacacagaggaagacattccattgttgcggaatgttgctaatctaatg
gcagcatcgggctgtgaagttccgccctggctcatggagttgcaaaaaaagaagtggaag
aagcaccggcccaaaagagattcaatctcaacaaaaccagacctataa
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