Vigna angularis (adzuki bean): 108328991
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Entry
108328991 CDS
T04660
Name
(RefSeq) uncharacterized protein LOC108328991 isoform X2
KO
K12830
splicing factor 3B subunit 3
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108328991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108328991
03041 Spliceosome [BR:
var03041
]
108328991
03036 Chromosome and associated proteins [BR:
var03036
]
108328991
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
108328991
Spliceosome [BR:
var03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
108328991
Complex B
108328991
Complex C
U2 SnRNP specific factors
108328991
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
108328991
TFTC complex
108328991
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
108328991
NCBI-ProteinID:
XP_017418430
UniProt:
A0A0L9U9W7
LinkDB
All DBs
Position
2:complement(50136744..50152467)
Genome browser
AA seq
1366 aa
AA seq
DB search
MAVSEEECSSAKSGPSSSSSASRYYLSKCVLRGSVVLQVLYAHIRSPSSNDIIFGKETSI
ELVVIEDDGNVQSVCDQPVFGTIKDLAILPWNEKFRARDPQLWGKDLLVATSDSGKLSLL
TFCNEMHRFVSVTHIQMSIPGNPLDLPGRRLAVDSSGCFIASSAYEDRLVMFSMSMSSGD
IIDERILYPSESEGTASSSRSIQRTSMRGTIWSICFISQDSRQPSKEHNPVLAVIINRRG
ALQNELLLLEWNVEAHKIFVISQYAEAGPLAYDIAEVPNSGGLAFLFRTGDVLLMDLRDP
RNPFCVYKTNLNILPNAMEEQTYVDDSCKLHDVDDERFNVAACALLELSDYDPMSIDSDS
GGANSGYKYICSWSWAPENNRDPRMIFCVDTGEFFMIEVLFDSEGPKVNLSECLYKGLPC
KALLWVEGGYVAALVEMGDGVVLKLEDGRLCYTNPIQNIAPILDMAVVDYRDEKHDQMFA
CCGVAPEGSLRIIRNGINVENLHRTASIYQGVTGTWTVRMKITDSHHSFLVLSFVEETRI
LSVGLSFTDVTDSVGFEPNVCTLACGLVTDGVLVQIHHCTVKLCLPTKAAHSEGIPLPSP
ISTSWSPDNVSISLGAVGHNFIVVSTSNPCFLFILGVRLLSAYQYEIYEMQHLVLQNELS
CISIPGQEIEQKPSNSSISANNSNISSFQSGVDISKTFVIGTHRPSVEIWFFAPGGGITV
VACGTISLTNTIGTAISGCVPQDVRLVFVDKYYVLAGLRNGMLLRFEWPVEPCPSSPINM
VDTALSSINLVNSASNVLGKRNDPPSTLQLIAIRRIGITPVFLVPLGDTLDADIIALSDR
PWLLHSARHSLSYTSISFQPSTHVTPVCSVECPKGILFVAENCLHLVEMVHSKRLNMQKF
HLEGTPRKVLYHDESKMLLVMRTDLNCGTCLSDICCVDPLSGSVVSTFRLELGETGKCME
LIRVGSEQVLVVGTSLSSGPAIMPSGEAESCKGRLLVLCLVHVQNSDSGSMTFCSKGGSS
SQKTSPFHEIVSYAPEQLSSSSLGSSPDDNSSDGIKLDENEVWQFRLAYATKWQGVVFKI
CPYLDRYFLASAGNAFYVCGFPNDNPQRVRRYAMGRTHHMITSLSAHFTRIAVGDCRDGI
ILFSYHEEARKLEQLCCDPSRRLVADCILMDADTAVVSDRKGGIAILCSNHLEDNASTEC
NMTLSCAYFMAEIALSVQKGSYSYRLPADDVLQGGNGPKTNVDSLQNTIIASTLLGSIMI
FIPLSREEYELLEAVQERLVVHQLTAPVLGNDHNEFRRREIRGGVPKILDGDVLTQFLEL
TSMQQKMILSSEPPDIAKPSLKPLLPPNVSVNQVVQLLERVHYALN
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttccgaagaggaatgctcttcagcgaagtctggtccttcttcttcttcctcc
gcctcgcgctactacctctccaaatgcgtcctcagaggaagcgtcgttcttcaggtcctc
tacgctcacattcgttctccctcctctaatgacatcatttttggcaaggagacgtctatt
gaattggtggttattgaggatgatgggaatgtgcaatctgtgtgtgatcagcccgtcttt
ggcaccatcaaagatcttgccatattgccttggaacgagaagtttcgtgcacgtgatcct
cagctgtggggtaaagaccttttggttgctacatccgattctgggaagctgtcgttgctc
acgttttgcaatgaaatgcacaggtttgtttctgtaacacatatacagatgtctattcct
ggaaacccattggatcttcctggaagaaggttagccgttgattccagtggttgttttatt
gcttctagtgcatacgaagatcggctggttatgttttctatgtcgatgtccagtggtgat
atcattgatgagagaattctatatccttcggaaagtgaaggaactgcaagctcttccaga
agcatccaaagaaccagtatgcgtggtaccatttggagcatctgcttcatttcacaagat
tccagacaaccaagcaaggagcataatcctgtacttgctgttattataaataggagggga
gcccttcaaaatgaattgctattattggaatggaatgttgaagcacacaaaatatttgtt
atttctcagtatgctgaagctgggcctctggcatatgacattgctgaagttcctaactcc
gggggacttgcattcctgttcaggactggtgatgttctcttaatggatcttagagatccc
cgcaacccattctgtgtctataagactaacttgaacattttgccaaatgccatggaagag
cagacttatgtggatgactcttgtaaattacacgatgttgacgatgaacgctttaatgtt
gctgcctgtgctttgttggaactgagcgattatgatcctatgtccatagacagtgacagt
ggtggtgctaattcaggctacaaatacatatgctcatggagttgggcacctgaaaataat
agagatcctaggatgatcttctgtgtagatactggggaattttttatgattgaagttctt
tttgattctgaaggccctaaagttaatctgtctgagtgtctctataaaggtctgccgtgt
aaagcacttttgtgggttgaaggtggatatgtagctgcccttgtggaaatgggggatggt
gtggttctgaaattggaagatggaaggctatgctatacaaaccctattcaaaacattgca
ccaatcttggatatggcagttgtagattatcgtgatgagaagcatgatcaaatgtttgct
tgctgtggtgtggctccagaggggtcattaaggataattcgaaatggtattaatgtggaa
aatctacacaggactgcttctatatatcaaggggtaactggtacttggactgtcagaatg
aaaattactgattcacatcattcttttctagttctatcgtttgttgaggaaaccagaata
ttgtcagttgggttaagttttactgatgtgactgattcagttggtttcgaacctaatgtc
tgtactctggcatgtggccttgtgactgatggtgtacttgttcagatccaccactgtact
gttaagctttgtttgcccactaaagctgctcattctgaaggtatccctttgccctctcct
atttccacatcttggtctccagacaatgtgagtatcagtttgggggcagttgggcataat
ttcatagttgtgtcaacctctaacccatgctttttgtttatccttggggttagattgcta
tcagcttatcaatatgaaatttatgaaatgcaacatttggtactgcagaatgaattatca
tgcatttccatccctggacaagaaattgagcaaaaaccatcaaattcatccatttcagca
aataatagtaacatctcttctttccaaagtggagtggacatcagtaaaacctttgttatt
ggtacacacaggccctctgtggaaatttggtttttcgcaccaggtggaggaattacagta
gtggcttgtgggacaatttcattgactaatacaataggtactgccatcagtggttgtgta
cctcaagatgtacgacttgtatttgttgataagtattatgttcttgctggattgaggaat
ggaatgcttctccgctttgagtggccggtggaaccatgtccatcatcaccaataaatatg
gtggatactgctttatcttctataaatttggtaaattctgcaagcaatgttttaggcaag
agaaacgaccctccttcaacacttcaattgattgccattcgacgcattggcattactcca
gttttcttggtgccactaggtgacacactggatgctgatataattgctcttagtgatagg
ccttggttgttgcatagtgcaagacatagcctttcgtatacttctatctcatttcaacct
tccacacatgtgactcctgtttgctctgttgagtgtccaaaaggaatattgtttgttgca
gaaaactgtttacatctggtggagatggttcacagcaagagacttaatatgcagaagttt
catttagagggcactcctaggaaggtcctgtatcacgatgaaagcaaaatgttgctagta
atgaggactgacctgaattgtggtacatgtctgtctgacatatgttgtgtggatccccta
agtggatcagtagtgtcgacttttagacttgaacttggtgaaacaggaaagtgcatggaa
ttaataagagttggaagtgagcaagtgcttgttgttggaactagtctgtcttctggtcca
gccataatgcccagtggtgaagctgaaagttgcaagggtcgtcttcttgttctttgtctt
gttcatgtgcaaaattcagatagtggttcgatgacattctgttcaaagggagggtcatca
tctcaaaaaacttcgccattccatgaaattgtttcatatgctcctgaacagttatcaagc
agcagcctgggcagcagtcctgatgataatagttctgatggcatcaaacttgatgaaaat
gaagtatggcagttccgattggcttatgcaacaaaatggcagggggtggtttttaaaatc
tgtccttatcttgatcgttacttcttggcatctgctggcaatgctttctatgtttgtggt
ttccctaatgacaatcctcaaagagtgagaaggtatgctatgggaaggacgcaccacatg
ataacatctttgagtgcacattttacaagaattgcagttggggattgtcgtgatggaatc
attttattttcttatcatgaggaagctagaaaattggagcaactttgctgtgatccatca
cgaaggttagttgctgattgcattttgatggatgctgatacagctgttgtttcggatcga
aaaggaggcattgctattttatgttcaaatcatttggaagataatgcaagtactgaatgc
aacatgacactaagctgtgcttatttcatggctgagattgccttgagcgtccagaagggc
tcatattcatacagacttccagctgatgatgttttgcaaggcggcaatggccccaagaca
aatgttgattcactacaaaatactattattgccagtaccctgttaggaagcataatgatc
ttcatccctttatcaagggaagaatatgagttattagaagctgtgcaagaaagactcgtt
gtccaccagttgaccgcacctgttctaggaaatgatcataacgagtttcgccgtcgtgaa
atccgaggtggagtacccaagatacttgatggtgacgtgttaacccagtttctggagctg
acaagtatgcagcaaaagatgattttgtcttccgagccacctgatatagcaaaaccaagt
ttgaagccactcctaccccccaatgtttctgtaaatcaggtggttcaacttcttgaacga
gttcattatgctctgaactaa
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integrated database retrieval system
